Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 MIR572-201ENST00000384983 95 ntBASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 TERF1P2-201ENST00000583350 1212 ntBASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RP1L1Q8IWN7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 AL022069.1-201ENST00000568025 1636 ntBASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 AC004911.1-201ENST00000416316 871 ntBASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.43■□□□□ 0.86
RP1L1Q8IWN7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.42■□□□□ 0.86
RP1L1Q8IWN7 AC135731.1-201ENST00000569415 2548 ntBASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 TSPY26P-201ENST00000476365 1326 ntBASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 RAP2CP1-201ENST00000605103 478 ntBASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RP1L1Q8IWN7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 AC126544.1-201ENST00000580842 1059 ntBASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RP1L1Q8IWN7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RP1L1Q8IWN7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
RP1L1Q8IWN7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RP1L1Q8IWN7 KRT18P14-201ENST00000534205 1250 ntBASIC20.39■□□□□ 0.85
RP1L1Q8IWN7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RP1L1Q8IWN7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.39■□□□□ 0.85
RP1L1Q8IWN7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 CCDC92B-201ENST00000575506 885 ntBASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 AC016769.1-201ENST00000409132 1010 ntBASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RP1L1Q8IWN7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 AC012414.1-201ENST00000556676 535 ntBASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RP1L1Q8IWN7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RP1L1Q8IWN7 NTF6G-201ENST00000591094 616 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms