Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 pRNA.5-201ENST00000612139 90 ntBASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 pRNA.11-201ENST00000618423 90 ntBASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 pRNA.13-201ENST00000619112 90 ntBASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 AC138932.3-201ENST00000567634 1902 ntBASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 AC097381.1-201ENST00000429019 1296 ntBASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 AL161729.1-201ENST00000604104 1402 ntBASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SFTPA1Q8IWL2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 AC233992.3-201ENST00000607491 485 ntBASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SFTPA1Q8IWL2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SFTPA1Q8IWL2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 IRS3P-201ENST00000223076 1006 ntBASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SFTPA1Q8IWL2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 BX842568.3-201ENST00000418104 571 ntBASIC23■■□□□ 1.27
SFTPA1Q8IWL2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 AC104564.3-201ENST00000582367 638 ntBASIC23■■□□□ 1.27
SFTPA1Q8IWL2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SFTPA1Q8IWL2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.99■■□□□ 1.27
SFTPA1Q8IWL2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 AP003733.4-201ENST00000623785 1697 ntBASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 AL162430.1-201ENST00000480705 870 ntBASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SFTPA1Q8IWL2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SFTPA1Q8IWL2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 SLC47A1P1-202ENST00000449666 945 ntBASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
SFTPA1Q8IWL2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms