Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 AC131274.2-201ENST00000580697 1507 ntBASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC44A2Q8IWA5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 BX664725.1-201ENST00000438252 379 ntBASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC44A2Q8IWA5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC44A2Q8IWA5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.33■■□□□ 1
SLC44A2Q8IWA5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.33■■□□□ 1
SLC44A2Q8IWA5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 AL161729.1-201ENST00000604104 1402 ntBASIC21.32■■□□□ 1
SLC44A2Q8IWA5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.32■■□□□ 1
SLC44A2Q8IWA5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 AC009299.2-201ENST00000482477 511 ntBASIC21.31■■□□□ 1
SLC44A2Q8IWA5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A2Q8IWA5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A2Q8IWA5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A2Q8IWA5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 AC021242.3-201ENST00000607598 1377 ntBASIC21.28■■□□□ 1
SLC44A2Q8IWA5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 KRT125P-201ENST00000546827 989 ntBASIC21.28■■□□□ 1
SLC44A2Q8IWA5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 PKD1P6-201ENST00000343738 4769 ntBASIC21.28■■□□□ 1
SLC44A2Q8IWA5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC44A2Q8IWA5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 AC239859.2-201ENST00000444165 318 ntBASIC21.27■■□□□ 1
SLC44A2Q8IWA5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.27■■□□□ 1
SLC44A2Q8IWA5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms