Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.94■□□□□ 0.78
LINC00346Q8IVM7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.93■□□□□ 0.78
LINC00346Q8IVM7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC00346Q8IVM7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00346Q8IVM7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 SNX5-217ENST00000606557 1087 ntBASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00346Q8IVM7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00346Q8IVM7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 AC137630.3-201ENST00000607245 391 ntBASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms