Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRTM4Q86VH4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRRTM4Q86VH4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRTM4Q86VH4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
LRRTM4Q86VH4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 AC092171.4-201ENST00000609130 632 ntBASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRTM4Q86VH4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRTM4Q86VH4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 AC096631.2-201ENST00000436136 790 ntBASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 AC099791.2-201ENST00000605725 427 ntBASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 AC241377.3-202ENST00000626088 1088 ntBASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 AC241585.3-202ENST00000628937 1088 ntBASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 AC245100.8-202ENST00000629247 1058 ntBASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRTM4Q86VH4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 DUX4L19-201ENST00000557448 1267 ntBASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRTM4Q86VH4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRRTM4Q86VH4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 AL139246.5-201ENST00000606645 996 ntBASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRRTM4Q86VH4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 UNC93B3-201ENST00000308076 687 ntBASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 AC110285.6-201ENST00000617652 491 ntBASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.11■■□□□ 1.13
LRRTM4Q86VH4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms