Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
DDX53Q86TM3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX53Q86TM3 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX53Q86TM3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX53Q86TM3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX53Q86TM3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX53Q86TM3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX53Q86TM3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 AC126544.1-201ENST00000580842 1059 ntBASIC24.11■■□□□ 1.45
DDX53Q86TM3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX53Q86TM3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
DDX53Q86TM3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX53Q86TM3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX53Q86TM3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX53Q86TM3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX53Q86TM3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX53Q86TM3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX53Q86TM3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX53Q86TM3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX53Q86TM3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
DDX53Q86TM3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX53Q86TM3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX53Q86TM3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX53Q86TM3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX53Q86TM3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX53Q86TM3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DDX53Q86TM3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX53Q86TM3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
DDX53Q86TM3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX53Q86TM3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX53Q86TM3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX53Q86TM3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX53Q86TM3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX53Q86TM3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX53Q86TM3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX53Q86TM3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 SLC47A1P1-202ENST00000449666 945 ntBASIC24.06■■□□□ 1.44
DDX53Q86TM3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.06■■□□□ 1.44
DDX53Q86TM3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX53Q86TM3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX53Q86TM3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX53Q86TM3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX53Q86TM3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
DDX53Q86TM3 TSPY26P-201ENST00000476365 1326 ntBASIC24.05■■□□□ 1.44
DDX53Q86TM3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX53Q86TM3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX53Q86TM3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.04■■□□□ 1.44
DDX53Q86TM3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.04■■□□□ 1.44
DDX53Q86TM3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX53Q86TM3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX53Q86TM3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.03■■□□□ 1.44
DDX53Q86TM3 AC034268.1-201ENST00000441047 882 ntBASIC24.03■■□□□ 1.44
DDX53Q86TM3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.03■■□□□ 1.44
DDX53Q86TM3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX53Q86TM3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
DDX53Q86TM3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX53Q86TM3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX53Q86TM3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX53Q86TM3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.02■■□□□ 1.44
DDX53Q86TM3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX53Q86TM3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX53Q86TM3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX53Q86TM3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.02■■□□□ 1.44
DDX53Q86TM3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX53Q86TM3 AP003733.4-201ENST00000623785 1697 ntBASIC24.02■■□□□ 1.44
DDX53Q86TM3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.02■■□□□ 1.43
DDX53Q86TM3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 YBX1P1-201ENST00000445822 960 ntBASIC24.01■■□□□ 1.43
DDX53Q86TM3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX53Q86TM3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
DDX53Q86TM3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms