Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 GUSBP6-202ENST00000438529 1198 ntBASIC19.36■□□□□ 0.69
CSMD2Q7Z408 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 KRT18P6-201ENST00000555540 1265 ntBASIC19.36■□□□□ 0.69
CSMD2Q7Z408 AC126544.1-201ENST00000580842 1059 ntBASIC19.36■□□□□ 0.69
CSMD2Q7Z408 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 AL109923.1-201ENST00000618799 583 ntBASIC19.35■□□□□ 0.69
CSMD2Q7Z408 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.35■□□□□ 0.69
CSMD2Q7Z408 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.35■□□□□ 0.69
CSMD2Q7Z408 AL354811.1-201ENST00000610286 706 ntBASIC19.35■□□□□ 0.69
CSMD2Q7Z408 CD99P1-205ENST00000527459 561 ntBASIC19.34■□□□□ 0.69
CSMD2Q7Z408 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 AC241377.3-202ENST00000626088 1088 ntBASIC19.34■□□□□ 0.69
CSMD2Q7Z408 AC241585.3-202ENST00000628937 1088 ntBASIC19.34■□□□□ 0.69
CSMD2Q7Z408 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD2Q7Z408 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSMD2Q7Z408 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.33■□□□□ 0.69
CSMD2Q7Z408 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSMD2Q7Z408 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CSMD2Q7Z408 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 IGHV3-19-201ENST00000521488 291 ntBASIC19.33■□□□□ 0.68
CSMD2Q7Z408 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSMD2Q7Z408 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD2Q7Z408 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.31■□□□□ 0.68
CSMD2Q7Z408 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 AC142086.2-201ENST00000569753 217 ntBASIC19.31■□□□□ 0.68
CSMD2Q7Z408 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.31■□□□□ 0.68
CSMD2Q7Z408 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 AC097639.1-201ENST00000565519 1891 ntBASIC19.3■□□□□ 0.68
CSMD2Q7Z408 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD2Q7Z408 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 MIR572-201ENST00000384983 95 ntBASIC19.29■□□□□ 0.68
CSMD2Q7Z408 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 MIR663A-201ENST00000385250 93 ntBASIC19.29■□□□□ 0.68
CSMD2Q7Z408 AC016769.1-201ENST00000409132 1010 ntBASIC19.29■□□□□ 0.68
CSMD2Q7Z408 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.29■□□□□ 0.68
CSMD2Q7Z408 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 AP005435.1-201ENST00000529293 1178 ntBASIC19.28■□□□□ 0.68
CSMD2Q7Z408 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD2Q7Z408 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms