Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
COPS6Q7L5N1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
COPS6Q7L5N1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COPS6Q7L5N1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
COPS6Q7L5N1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
COPS6Q7L5N1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COPS6Q7L5N1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 AC091305.1-201ENST00000479476 895 ntBASIC28.75■■■□□ 2.19
COPS6Q7L5N1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COPS6Q7L5N1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.74■■■□□ 2.19
COPS6Q7L5N1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 AC136469.2-201ENST00000623944 1028 ntBASIC28.74■■■□□ 2.19
COPS6Q7L5N1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.74■■■□□ 2.19
COPS6Q7L5N1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.73■■■□□ 2.19
COPS6Q7L5N1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.72■■■□□ 2.19
COPS6Q7L5N1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.72■■■□□ 2.19
COPS6Q7L5N1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.72■■■□□ 2.19
COPS6Q7L5N1 AC008764.7-201ENST00000593779 1081 ntBASIC28.72■■■□□ 2.19
COPS6Q7L5N1 CA15P2-201ENST00000611168 834 ntBASIC28.72■■■□□ 2.19
COPS6Q7L5N1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
COPS6Q7L5N1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COPS6Q7L5N1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 RASA4CP-201ENST00000424092 1398 ntBASIC28.71■■■□□ 2.19
COPS6Q7L5N1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
COPS6Q7L5N1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COPS6Q7L5N1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
COPS6Q7L5N1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.7■■■□□ 2.19
COPS6Q7L5N1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.7■■■□□ 2.18
COPS6Q7L5N1 pRNA.6-201ENST00000610482 90 ntBASIC28.7■■■□□ 2.18
COPS6Q7L5N1 pRNA.5-201ENST00000612139 90 ntBASIC28.7■■■□□ 2.18
COPS6Q7L5N1 pRNA.11-201ENST00000618423 90 ntBASIC28.7■■■□□ 2.18
COPS6Q7L5N1 pRNA.13-201ENST00000619112 90 ntBASIC28.7■■■□□ 2.18
COPS6Q7L5N1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COPS6Q7L5N1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COPS6Q7L5N1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.69■■■□□ 2.18
COPS6Q7L5N1 AC141586.4-201ENST00000624558 1573 ntBASIC28.68■■■□□ 2.18
COPS6Q7L5N1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COPS6Q7L5N1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
COPS6Q7L5N1 AC027682.1-201ENST00000562846 899 ntBASIC28.68■■■□□ 2.18
COPS6Q7L5N1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
COPS6Q7L5N1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
COPS6Q7L5N1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
COPS6Q7L5N1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 AC099791.1-201ENST00000416440 715 ntBASIC28.67■■■□□ 2.18
COPS6Q7L5N1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 RARRES2P6-201ENST00000567333 442 ntBASIC28.67■■■□□ 2.18
COPS6Q7L5N1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COPS6Q7L5N1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COPS6Q7L5N1 AC026271.2-201ENST00000428091 497 ntBASIC28.65■■■□□ 2.18
COPS6Q7L5N1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms