Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
CD109Q6YHK3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CD109Q6YHK3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
CD109Q6YHK3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC35.04■■■■□ 3.2
CD109Q6YHK3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC35.04■■■■□ 3.2
CD109Q6YHK3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
CD109Q6YHK3 GAS2L1P2-201ENST00000436355 1356 ntBASIC35.04■■■■□ 3.2
CD109Q6YHK3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC35.03■■■■□ 3.2
CD109Q6YHK3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC35.03■■■■□ 3.2
CD109Q6YHK3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CD109Q6YHK3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
CD109Q6YHK3 NT5C3AP1-201ENST00000394500 1012 ntBASIC35.03■■■■□ 3.2
CD109Q6YHK3 AL355802.2-201ENST00000402069 882 ntBASIC35.03■■■■□ 3.2
CD109Q6YHK3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC35.03■■■■□ 3.2
CD109Q6YHK3 AC026185.1-201ENST00000445748 174 ntBASIC35.03■■■■□ 3.2
CD109Q6YHK3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC35.03■■■■□ 3.2
CD109Q6YHK3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC35.02■■■■□ 3.2
CD109Q6YHK3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC35.02■■■■□ 3.2
CD109Q6YHK3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CD109Q6YHK3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CD109Q6YHK3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CD109Q6YHK3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
CD109Q6YHK3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC35.02■■■■□ 3.2
CD109Q6YHK3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
CD109Q6YHK3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CD109Q6YHK3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.01■■■■□ 3.2
CD109Q6YHK3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CD109Q6YHK3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC35.01■■■■□ 3.2
CD109Q6YHK3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC35.01■■■■□ 3.2
CD109Q6YHK3 AC066615.1-201ENST00000640911 628 ntBASIC35.01■■■■□ 3.2
CD109Q6YHK3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
CD109Q6YHK3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC35.01■■■■□ 3.19
CD109Q6YHK3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC35.01■■■■□ 3.19
CD109Q6YHK3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.19
CD109Q6YHK3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CD109Q6YHK3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
CD109Q6YHK3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC35■■■■□ 3.19
CD109Q6YHK3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
CD109Q6YHK3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC35■■■■□ 3.19
CD109Q6YHK3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC35■■■■□ 3.19
CD109Q6YHK3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CD109Q6YHK3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CD109Q6YHK3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
CD109Q6YHK3 AC016769.1-201ENST00000409132 1010 ntBASIC34.98■■■■□ 3.19
CD109Q6YHK3 AC137761.2-201ENST00000561729 223 ntBASIC34.98■■■■□ 3.19
CD109Q6YHK3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC34.98■■■■□ 3.19
CD109Q6YHK3 AC145350.3-201ENST00000569033 163 ntBASIC34.98■■■■□ 3.19
CD109Q6YHK3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.98■■■■□ 3.19
CD109Q6YHK3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC34.98■■■■□ 3.19
CD109Q6YHK3 AC141586.4-201ENST00000624558 1573 ntBASIC34.98■■■■□ 3.19
CD109Q6YHK3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC34.97■■■■□ 3.19
CD109Q6YHK3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CD109Q6YHK3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
CD109Q6YHK3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.97■■■■□ 3.19
CD109Q6YHK3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC34.97■■■■□ 3.19
CD109Q6YHK3 CROCCP5-201ENST00000436658 830 ntBASIC34.97■■■■□ 3.19
CD109Q6YHK3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC34.97■■■■□ 3.19
CD109Q6YHK3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
CD109Q6YHK3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC34.97■■■■□ 3.19
CD109Q6YHK3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CD109Q6YHK3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CD109Q6YHK3 AP005435.1-201ENST00000529293 1178 ntBASIC34.96■■■■□ 3.19
CD109Q6YHK3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CD109Q6YHK3 AC010501.1-201ENST00000606270 1962 ntBASIC34.96■■■■□ 3.19
CD109Q6YHK3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
CD109Q6YHK3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC34.95■■■■□ 3.19
CD109Q6YHK3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.19
CD109Q6YHK3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.19
CD109Q6YHK3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC34.95■■■■□ 3.19
CD109Q6YHK3 AL109923.1-201ENST00000618799 583 ntBASIC34.95■■■■□ 3.19
CD109Q6YHK3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
CD109Q6YHK3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.95■■■■□ 3.18
CD109Q6YHK3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
CD109Q6YHK3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC34.94■■■■□ 3.18
CD109Q6YHK3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
CD109Q6YHK3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
CD109Q6YHK3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC34.94■■■■□ 3.18
CD109Q6YHK3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CD109Q6YHK3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.94■■■■□ 3.18
CD109Q6YHK3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.93■■■■□ 3.18
CD109Q6YHK3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CD109Q6YHK3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
CD109Q6YHK3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CD109Q6YHK3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.93■■■■□ 3.18
CD109Q6YHK3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 AC010525.1-201ENST00000585559 441 ntBASIC34.92■■■■□ 3.18
CD109Q6YHK3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.92■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms