Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC00575Q6W349 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00575Q6W349 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 SLC25A24-204ENST00000569674 2357 ntBASIC14.29□□□□□ -0.12
LINC00575Q6W349 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LINC00575Q6W349 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00575Q6W349 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00575Q6W349 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00575Q6W349 AL162393.1-201ENST00000437852 946 ntBASIC14.28□□□□□ -0.12
LINC00575Q6W349 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00575Q6W349 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00575Q6W349 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00575Q6W349 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00575Q6W349 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00575Q6W349 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00575Q6W349 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00575Q6W349 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00575Q6W349 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC00575Q6W349 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00575Q6W349 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00575Q6W349 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00575Q6W349 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LINC00575Q6W349 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00575Q6W349 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINC00575Q6W349 AC025884.2-201ENST00000553429 711 ntBASIC14.27□□□□□ -0.13
LINC00575Q6W349 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00575Q6W349 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00575Q6W349 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00575Q6W349 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00575Q6W349 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00575Q6W349 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00575Q6W349 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00575Q6W349 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00575Q6W349 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 C11orf96-202ENST00000528572 1834 ntBASIC14.26□□□□□ -0.13
LINC00575Q6W349 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00575Q6W349 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00575Q6W349 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 AC092053.2-201ENST00000640557 1818 ntBASIC14.25□□□□□ -0.13
LINC00575Q6W349 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LINC00575Q6W349 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00575Q6W349 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms