Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNIP4Q6PIL6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KCNIP4Q6PIL6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP4Q6PIL6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 AC092068.2-201ENST00000590491 1708 ntBASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP4Q6PIL6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 HLA-L-211ENST00000482052 1765 ntBASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP4Q6PIL6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP4Q6PIL6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP4Q6PIL6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP4Q6PIL6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
KCNIP4Q6PIL6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 RPS2P35-201ENST00000443417 897 ntBASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP4Q6PIL6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.38■□□□□ 0.37
KCNIP4Q6PIL6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms