Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 STX6-204ENST00000542060 4809 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 AC145676.1-201ENST00000514988 2004 ntBASIC11.28□□□□□ -0.6
LINC01554Q52M75 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 MIR762-201ENST00000390236 83 ntBASIC11.28□□□□□ -0.6
LINC01554Q52M75 CAHM-201ENST00000604200 896 ntBASIC11.28□□□□□ -0.6
LINC01554Q52M75 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01554Q52M75 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01554Q52M75 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01554Q52M75 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01554Q52M75 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01554Q52M75 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC01554Q52M75 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01554Q52M75 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
LINC01554Q52M75 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 AC106820.2-201ENST00000563775 3264 ntBASIC11.27□□□□□ -0.61
LINC01554Q52M75 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC01554Q52M75 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
LINC01554Q52M75 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC01554Q52M75 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01554Q52M75 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 MEST-211ENST00000437945 1455 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 AC137767.1-201ENST00000602918 1920 ntBASIC11.26□□□□□ -0.61
LINC01554Q52M75 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
LINC01554Q52M75 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01554Q52M75 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01554Q52M75 AC136428.2-201ENST00000563187 214 ntBASIC11.25□□□□□ -0.61
LINC01554Q52M75 AC005559.1-201ENST00000589661 871 ntBASIC11.25□□□□□ -0.61
LINC01554Q52M75 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01554Q52M75 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms