Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 AC239859.2-201ENST00000444165 318 ntBASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO1Q2MKA7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 MIR4787-201ENST00000607364 84 ntBASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO1Q2MKA7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO1Q2MKA7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RSPO1Q2MKA7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO1Q2MKA7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RSPO1Q2MKA7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO1Q2MKA7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO1Q2MKA7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 AC079630.1-202ENST00000618127 1840 ntBASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 KRT125P-201ENST00000546827 989 ntBASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO1Q2MKA7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO1Q2MKA7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO1Q2MKA7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RSPO1Q2MKA7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 AC005703.6-201ENST00000623265 1329 ntBASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 AC012676.1-201ENST00000574705 1949 ntBASIC19.59■□□□□ 0.73
RSPO1Q2MKA7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO1Q2MKA7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.58■□□□□ 0.73
RSPO1Q2MKA7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.58■□□□□ 0.73
RSPO1Q2MKA7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms