Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC40.62■■■■■ 4.09
HMGXB3Q12766 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
HMGXB3Q12766 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC40.61■■■■■ 4.09
HMGXB3Q12766 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
HMGXB3Q12766 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC40.61■■■■■ 4.09
HMGXB3Q12766 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC40.61■■■■■ 4.09
HMGXB3Q12766 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC40.61■■■■■ 4.09
HMGXB3Q12766 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
HMGXB3Q12766 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC40.6■■■■■ 4.09
HMGXB3Q12766 OR2I1P-207ENST00000453522 948 ntBASIC40.6■■■■■ 4.09
HMGXB3Q12766 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC40.6■■■■■ 4.09
HMGXB3Q12766 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC40.59■■■■■ 4.09
HMGXB3Q12766 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC40.59■■■■■ 4.09
HMGXB3Q12766 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 GXYLT1P5-201ENST00000614548 1189 ntBASIC40.59■■■■■ 4.09
HMGXB3Q12766 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC40.59■■■■■ 4.09
HMGXB3Q12766 GAS2L1P2-201ENST00000436355 1356 ntBASIC40.58■■■■■ 4.09
HMGXB3Q12766 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC40.58■■■■■ 4.09
HMGXB3Q12766 AC141586.4-201ENST00000624558 1573 ntBASIC40.58■■■■■ 4.09
HMGXB3Q12766 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
HMGXB3Q12766 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
HMGXB3Q12766 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
HMGXB3Q12766 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC40.57■■■■■ 4.09
HMGXB3Q12766 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC40.57■■■■■ 4.08
HMGXB3Q12766 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC40.57■■■■■ 4.08
HMGXB3Q12766 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC40.57■■■■■ 4.08
HMGXB3Q12766 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC40.57■■■■■ 4.08
HMGXB3Q12766 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC40.56■■■■■ 4.08
HMGXB3Q12766 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC40.56■■■■■ 4.08
HMGXB3Q12766 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC40.56■■■■■ 4.08
HMGXB3Q12766 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC40.56■■■■■ 4.08
HMGXB3Q12766 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC40.56■■■■■ 4.08
HMGXB3Q12766 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
HMGXB3Q12766 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC40.56■■■■■ 4.08
HMGXB3Q12766 USF2-207ENST00000595068 1612 ntTSL 5 BASIC40.55■■■■■ 4.08
HMGXB3Q12766 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC40.55■■■■■ 4.08
HMGXB3Q12766 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
HMGXB3Q12766 NT5C3AP1-201ENST00000394500 1012 ntBASIC40.55■■■■■ 4.08
HMGXB3Q12766 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
HMGXB3Q12766 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC40.55■■■■■ 4.08
HMGXB3Q12766 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC40.55■■■■■ 4.08
HMGXB3Q12766 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC40.55■■■■■ 4.08
HMGXB3Q12766 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC40.54■■■■■ 4.08
HMGXB3Q12766 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
HMGXB3Q12766 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
HMGXB3Q12766 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC40.53■■■■■ 4.08
HMGXB3Q12766 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC40.53■■■■■ 4.08
HMGXB3Q12766 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC40.53■■■■■ 4.08
HMGXB3Q12766 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
HMGXB3Q12766 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
HMGXB3Q12766 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
HMGXB3Q12766 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC40.52■■■■■ 4.08
HMGXB3Q12766 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
HMGXB3Q12766 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC40.52■■■■■ 4.08
HMGXB3Q12766 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC40.51■■■■■ 4.08
HMGXB3Q12766 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC40.51■■■■■ 4.08
HMGXB3Q12766 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC40.51■■■■■ 4.08
HMGXB3Q12766 HSCB-202ENST00000398941 955 ntTSL 2 BASIC40.51■■■■■ 4.08
HMGXB3Q12766 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC40.5■■■■■ 4.07
HMGXB3Q12766 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC40.5■■■■■ 4.07
HMGXB3Q12766 LHPP-203ENST00000392757 840 ntTSL 3 BASIC40.5■■■■■ 4.07
HMGXB3Q12766 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC40.5■■■■■ 4.07
HMGXB3Q12766 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC40.5■■■■■ 4.07
HMGXB3Q12766 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC40.5■■■■■ 4.07
HMGXB3Q12766 AC010525.1-201ENST00000585559 441 ntBASIC40.5■■■■■ 4.07
HMGXB3Q12766 TPRG1LP1-201ENST00000598702 760 ntBASIC40.5■■■■■ 4.07
HMGXB3Q12766 PPP1R14BP3-201ENST00000509033 445 ntBASIC40.49■■■■■ 4.07
HMGXB3Q12766 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC40.49■■■■■ 4.07
HMGXB3Q12766 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC40.48■■■■■ 4.07
HMGXB3Q12766 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC40.48■■■■■ 4.07
HMGXB3Q12766 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC40.48■■■■■ 4.07
HMGXB3Q12766 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
HMGXB3Q12766 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC40.48■■■■■ 4.07
HMGXB3Q12766 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
HMGXB3Q12766 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC40.48■■■■■ 4.07
HMGXB3Q12766 MPST-204ENST00000404393 1329 ntTSL 5 BASIC40.48■■■■■ 4.07
HMGXB3Q12766 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC40.47■■■■■ 4.07
HMGXB3Q12766 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC40.47■■■■■ 4.07
HMGXB3Q12766 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC40.47■■■■■ 4.07
HMGXB3Q12766 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC40.47■■■■■ 4.07
HMGXB3Q12766 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC40.47■■■■■ 4.07
HMGXB3Q12766 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC40.47■■■■■ 4.07
HMGXB3Q12766 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HMGXB3Q12766 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC40.47■■■■■ 4.07
HMGXB3Q12766 AC026185.1-201ENST00000445748 174 ntBASIC40.47■■■■■ 4.07
HMGXB3Q12766 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HMGXB3Q12766 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC40.46■■■■■ 4.07
HMGXB3Q12766 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
HMGXB3Q12766 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
HMGXB3Q12766 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC40.46■■■■■ 4.07
HMGXB3Q12766 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC40.45■■■■■ 4.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms