Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPP38P78345 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RPP38P78345 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RPP38P78345 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.26■□□□□ 0.99
RPP38P78345 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPP38P78345 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPP38P78345 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.26■□□□□ 0.99
RPP38P78345 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPP38P78345 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP38P78345 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RPP38P78345 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.25■□□□□ 0.99
RPP38P78345 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.25■□□□□ 0.99
RPP38P78345 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.25■□□□□ 0.99
RPP38P78345 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPP38P78345 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.25■□□□□ 0.99
RPP38P78345 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP38P78345 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.25■□□□□ 0.99
RPP38P78345 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP38P78345 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.24■□□□□ 0.99
RPP38P78345 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RPP38P78345 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RPP38P78345 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP38P78345 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP38P78345 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP38P78345 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.23■□□□□ 0.99
RPP38P78345 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.23■□□□□ 0.99
RPP38P78345 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPP38P78345 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RPP38P78345 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP38P78345 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP38P78345 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP38P78345 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP38P78345 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPP38P78345 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP38P78345 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.22■□□□□ 0.99
RPP38P78345 MTDHP2-201ENST00000601468 714 ntBASIC21.22■□□□□ 0.99
RPP38P78345 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RPP38P78345 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPP38P78345 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPP38P78345 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP38P78345 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RPP38P78345 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.21■□□□□ 0.99
RPP38P78345 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RPP38P78345 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP38P78345 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.21■□□□□ 0.99
RPP38P78345 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP38P78345 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP38P78345 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPP38P78345 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP38P78345 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP38P78345 TSPY9P-201ENST00000440215 945 ntBASIC21.21■□□□□ 0.99
RPP38P78345 TSPY11P-201ENST00000442607 1045 ntBASIC21.21■□□□□ 0.99
RPP38P78345 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.21■□□□□ 0.99
RPP38P78345 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.21■□□□□ 0.99
RPP38P78345 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.21■□□□□ 0.99
RPP38P78345 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RPP38P78345 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPP38P78345 AL161729.1-201ENST00000604104 1402 ntBASIC21.21■□□□□ 0.99
RPP38P78345 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP38P78345 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP38P78345 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP38P78345 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.2■□□□□ 0.98
RPP38P78345 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.2■□□□□ 0.98
RPP38P78345 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP38P78345 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP38P78345 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
RPP38P78345 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.2■□□□□ 0.98
RPP38P78345 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP38P78345 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.19■□□□□ 0.98
RPP38P78345 AL022069.1-201ENST00000568025 1636 ntBASIC21.19■□□□□ 0.98
RPP38P78345 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP38P78345 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP38P78345 KRT16P3-201ENST00000439127 1283 ntBASIC21.19■□□□□ 0.98
RPP38P78345 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP38P78345 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RPP38P78345 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.19■□□□□ 0.98
RPP38P78345 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.19■□□□□ 0.98
RPP38P78345 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP38P78345 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RPP38P78345 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.18■□□□□ 0.98
RPP38P78345 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.18■□□□□ 0.98
RPP38P78345 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.18■□□□□ 0.98
RPP38P78345 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP38P78345 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RPP38P78345 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms