Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.69■□□□□ 0.58
SUPT4H1P63272 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUPT4H1P63272 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.68■□□□□ 0.58
SUPT4H1P63272 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SUPT4H1P63272 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SUPT4H1P63272 AC007029.1-201ENST00000604183 313 ntBASIC18.68■□□□□ 0.58
SUPT4H1P63272 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.68■□□□□ 0.58
SUPT4H1P63272 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUPT4H1P63272 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUPT4H1P63272 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUPT4H1P63272 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUPT4H1P63272 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.67■□□□□ 0.58
SUPT4H1P63272 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.67■□□□□ 0.58
SUPT4H1P63272 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.67■□□□□ 0.58
SUPT4H1P63272 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.67■□□□□ 0.58
SUPT4H1P63272 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SUPT4H1P63272 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.66■□□□□ 0.58
SUPT4H1P63272 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SUPT4H1P63272 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SUPT4H1P63272 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.65■□□□□ 0.58
SUPT4H1P63272 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.65■□□□□ 0.58
SUPT4H1P63272 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.65■□□□□ 0.58
SUPT4H1P63272 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SUPT4H1P63272 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SUPT4H1P63272 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.64■□□□□ 0.57
SUPT4H1P63272 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.64■□□□□ 0.57
SUPT4H1P63272 AC139530.1-201ENST00000575312 1977 ntBASIC18.64■□□□□ 0.57
SUPT4H1P63272 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SUPT4H1P63272 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SUPT4H1P63272 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SUPT4H1P63272 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SUPT4H1P63272 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.63■□□□□ 0.57
SUPT4H1P63272 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.63■□□□□ 0.57
SUPT4H1P63272 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SUPT4H1P63272 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 ABHD17AP4-201ENST00000411545 909 ntBASIC18.62■□□□□ 0.57
SUPT4H1P63272 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 AL022069.1-201ENST00000568025 1636 ntBASIC18.62■□□□□ 0.57
SUPT4H1P63272 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.62■□□□□ 0.57
SUPT4H1P63272 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SUPT4H1P63272 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SUPT4H1P63272 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SUPT4H1P63272 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SUPT4H1P63272 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SUPT4H1P63272 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SUPT4H1P63272 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SUPT4H1P63272 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SUPT4H1P63272 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SUPT4H1P63272 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SUPT4H1P63272 C11orf96-202ENST00000528572 1834 ntBASIC18.61■□□□□ 0.57
SUPT4H1P63272 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.61■□□□□ 0.57
SUPT4H1P63272 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SUPT4H1P63272 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms