Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP46P62068 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP46P62068 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
USP46P62068 AC024257.2-201ENST00000549699 147 ntBASIC23.79■■□□□ 1.4
USP46P62068 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP46P62068 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
USP46P62068 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP46P62068 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.79■■□□□ 1.4
USP46P62068 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.78■■□□□ 1.4
USP46P62068 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.78■■□□□ 1.4
USP46P62068 AC135279.3-201ENST00000610945 1311 ntBASIC23.78■■□□□ 1.4
USP46P62068 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP46P62068 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.78■■□□□ 1.4
USP46P62068 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP46P62068 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP46P62068 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
USP46P62068 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP46P62068 AC133561.4-201ENST00000566112 224 ntBASIC23.77■■□□□ 1.4
USP46P62068 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.77■■□□□ 1.4
USP46P62068 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP46P62068 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
USP46P62068 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
USP46P62068 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 LINC00543-201ENST00000567234 1845 ntBASIC23.76■■□□□ 1.39
USP46P62068 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.76■■□□□ 1.39
USP46P62068 AL031432.3-201ENST00000607698 485 ntBASIC23.76■■□□□ 1.39
USP46P62068 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.76■■□□□ 1.39
USP46P62068 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.76■■□□□ 1.39
USP46P62068 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP46P62068 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
USP46P62068 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.75■■□□□ 1.39
USP46P62068 SERBP1P1-201ENST00000396021 1160 ntBASIC23.75■■□□□ 1.39
USP46P62068 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 AC006455.2-201ENST00000429931 906 ntBASIC23.75■■□□□ 1.39
USP46P62068 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.75■■□□□ 1.39
USP46P62068 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
USP46P62068 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
USP46P62068 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.75■■□□□ 1.39
USP46P62068 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP46P62068 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
USP46P62068 SYT6-210ENST00000641643 1587 ntBASIC23.74■■□□□ 1.39
USP46P62068 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
USP46P62068 AC004812.2-201ENST00000611079 2094 ntBASIC23.74■■□□□ 1.39
USP46P62068 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.74■■□□□ 1.39
USP46P62068 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.74■■□□□ 1.39
USP46P62068 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
USP46P62068 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.73■■□□□ 1.39
USP46P62068 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
USP46P62068 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.73■■□□□ 1.39
USP46P62068 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.73■■□□□ 1.39
USP46P62068 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.73■■□□□ 1.39
USP46P62068 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP46P62068 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP46P62068 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP46P62068 DUX4L19-201ENST00000557448 1267 ntBASIC23.72■■□□□ 1.39
USP46P62068 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.72■■□□□ 1.39
USP46P62068 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
USP46P62068 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP46P62068 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
USP46P62068 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP46P62068 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
USP46P62068 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP46P62068 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.71■■□□□ 1.39
USP46P62068 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP46P62068 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.71■■□□□ 1.39
USP46P62068 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP46P62068 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.71■■□□□ 1.39
USP46P62068 AC141586.4-201ENST00000624558 1573 ntBASIC23.71■■□□□ 1.39
USP46P62068 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP46P62068 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.71■■□□□ 1.39
USP46P62068 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.71■■□□□ 1.39
USP46P62068 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.71■■□□□ 1.39
USP46P62068 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP46P62068 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
USP46P62068 AC092171.4-201ENST00000609130 632 ntBASIC23.7■■□□□ 1.38
USP46P62068 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USP46P62068 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USP46P62068 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms