Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEC61A1P61619 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEC61A1P61619 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SEC61A1P61619 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.61■□□□□ 0.73
SEC61A1P61619 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.6■□□□□ 0.73
SEC61A1P61619 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SEC61A1P61619 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 GUSBP5-201ENST00000418136 578 ntBASIC19.6■□□□□ 0.73
SEC61A1P61619 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.6■□□□□ 0.73
SEC61A1P61619 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61A1P61619 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SEC61A1P61619 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SEC61A1P61619 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SEC61A1P61619 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.59■□□□□ 0.73
SEC61A1P61619 AC004812.2-201ENST00000611079 2094 ntBASIC19.59■□□□□ 0.73
SEC61A1P61619 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SEC61A1P61619 AC233723.2-201ENST00000623798 2106 ntBASIC19.58■□□□□ 0.73
SEC61A1P61619 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SEC61A1P61619 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SEC61A1P61619 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.58■□□□□ 0.72
SEC61A1P61619 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SEC61A1P61619 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
SEC61A1P61619 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEC61A1P61619 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.57■□□□□ 0.72
SEC61A1P61619 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SEC61A1P61619 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEC61A1P61619 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEC61A1P61619 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SEC61A1P61619 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 MIR4281-201ENST00000580852 62 ntBASIC19.56■□□□□ 0.72
SEC61A1P61619 MIR6089-201ENST00000616698 64 ntBASIC19.56■□□□□ 0.72
SEC61A1P61619 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEC61A1P61619 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.56■□□□□ 0.72
SEC61A1P61619 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A1P61619 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.55■□□□□ 0.72
SEC61A1P61619 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
SEC61A1P61619 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.55■□□□□ 0.72
SEC61A1P61619 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A1P61619 BX664725.1-201ENST00000438252 379 ntBASIC19.55■□□□□ 0.72
SEC61A1P61619 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SEC61A1P61619 Z92544.1-202ENST00000571933 1220 ntBASIC19.55■□□□□ 0.72
SEC61A1P61619 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.55■□□□□ 0.72
SEC61A1P61619 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.55■□□□□ 0.72
SEC61A1P61619 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
SEC61A1P61619 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A1P61619 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A1P61619 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A1P61619 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.54■□□□□ 0.72
SEC61A1P61619 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.54■□□□□ 0.72
SEC61A1P61619 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.54■□□□□ 0.72
SEC61A1P61619 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A1P61619 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.54■□□□□ 0.72
SEC61A1P61619 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A1P61619 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A1P61619 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
SEC61A1P61619 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEC61A1P61619 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A1P61619 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.53■□□□□ 0.72
SEC61A1P61619 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms