Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42P60953 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42P60953 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42P60953 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42P60953 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42P60953 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42P60953 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42P60953 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42P60953 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDC42P60953 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42P60953 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CDC42P60953 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDC42P60953 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42P60953 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42P60953 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42P60953 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC42P60953 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.6■□□□□ 0.89
CDC42P60953 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.6■□□□□ 0.89
CDC42P60953 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42P60953 AL022069.1-201ENST00000568025 1636 ntBASIC20.6■□□□□ 0.89
CDC42P60953 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42P60953 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42P60953 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42P60953 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42P60953 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42P60953 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDC42P60953 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC42P60953 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42P60953 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42P60953 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42P60953 ESRRAP2-201ENST00000418437 1549 ntBASIC20.58■□□□□ 0.88
CDC42P60953 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CDC42P60953 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC42P60953 AC242852.2-201ENST00000615738 1807 ntBASIC20.57■□□□□ 0.88
CDC42P60953 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDC42P60953 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDC42P60953 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC42P60953 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42P60953 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42P60953 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDC42P60953 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42P60953 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42P60953 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.56■□□□□ 0.88
CDC42P60953 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42P60953 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42P60953 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42P60953 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42P60953 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CDC42P60953 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42P60953 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42P60953 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42P60953 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDC42P60953 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42P60953 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDC42P60953 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDC42P60953 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42P60953 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.55■□□□□ 0.88
CDC42P60953 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42P60953 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42P60953 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42P60953 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42P60953 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms