Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC61BP60468 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC61BP60468 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
SEC61BP60468 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC61BP60468 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC61BP60468 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC61BP60468 MIR3181-201ENST00000578512 73 ntBASIC12.14□□□□□ -0.47
SEC61BP60468 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC61BP60468 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SEC61BP60468 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC61BP60468 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC61BP60468 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC61BP60468 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SEC61BP60468 AC141586.4-201ENST00000624558 1573 ntBASIC12.13□□□□□ -0.47
SEC61BP60468 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC61BP60468 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC61BP60468 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC61BP60468 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC61BP60468 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC61BP60468 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12.13□□□□□ -0.47
SEC61BP60468 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.13□□□□□ -0.47
SEC61BP60468 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC61BP60468 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC61BP60468 ALDH1A3-203ENST00000557963 1670 ntBASIC12.13□□□□□ -0.47
SEC61BP60468 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC61BP60468 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 pRNA.6-201ENST00000610482 90 ntBASIC12.12□□□□□ -0.47
SEC61BP60468 pRNA.5-201ENST00000612139 90 ntBASIC12.12□□□□□ -0.47
SEC61BP60468 pRNA.11-201ENST00000618423 90 ntBASIC12.12□□□□□ -0.47
SEC61BP60468 pRNA.13-201ENST00000619112 90 ntBASIC12.12□□□□□ -0.47
SEC61BP60468 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SEC61BP60468 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SEC61BP60468 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC61BP60468 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC61BP60468 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
SEC61BP60468 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SEC61BP60468 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SEC61BP60468 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC61BP60468 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC61BP60468 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC61BP60468 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC61BP60468 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC61BP60468 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SEC61BP60468 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC61BP60468 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC61BP60468 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC61BP60468 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC61BP60468 AC006455.2-201ENST00000429931 906 ntBASIC12.1□□□□□ -0.47
SEC61BP60468 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC61BP60468 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms