Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SUMO3P55854 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUMO3P55854 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SUMO3P55854 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUMO3P55854 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUMO3P55854 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUMO3P55854 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SUMO3P55854 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.49■□□□□ 0.87
SUMO3P55854 ANOS2P-203ENST00000472227 1816 ntBASIC20.49■□□□□ 0.87
SUMO3P55854 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SUMO3P55854 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.49■□□□□ 0.87
SUMO3P55854 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUMO3P55854 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SUMO3P55854 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.48■□□□□ 0.87
SUMO3P55854 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.48■□□□□ 0.87
SUMO3P55854 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.48■□□□□ 0.87
SUMO3P55854 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SUMO3P55854 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.48■□□□□ 0.87
SUMO3P55854 AC009102.2-201ENST00000606772 1639 ntBASIC20.48■□□□□ 0.87
SUMO3P55854 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SUMO3P55854 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.47■□□□□ 0.87
SUMO3P55854 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SUMO3P55854 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.46■□□□□ 0.87
SUMO3P55854 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SUMO3P55854 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SUMO3P55854 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
SUMO3P55854 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.46■□□□□ 0.87
SUMO3P55854 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SUMO3P55854 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.46■□□□□ 0.87
SUMO3P55854 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.46■□□□□ 0.87
SUMO3P55854 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.46■□□□□ 0.87
SUMO3P55854 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SUMO3P55854 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SUMO3P55854 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SUMO3P55854 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SUMO3P55854 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.45■□□□□ 0.86
SUMO3P55854 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SUMO3P55854 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.45■□□□□ 0.86
SUMO3P55854 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SUMO3P55854 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.45■□□□□ 0.86
SUMO3P55854 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SUMO3P55854 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
SUMO3P55854 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.45■□□□□ 0.86
SUMO3P55854 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUMO3P55854 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.44■□□□□ 0.86
SUMO3P55854 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUMO3P55854 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SUMO3P55854 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.44■□□□□ 0.86
SUMO3P55854 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.44■□□□□ 0.86
SUMO3P55854 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SUMO3P55854 AC144652.1-201ENST00000609974 1624 ntBASIC20.44■□□□□ 0.86
SUMO3P55854 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUMO3P55854 FP325331.1-202ENST00000623531 1380 ntBASIC20.44■□□□□ 0.86
SUMO3P55854 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SUMO3P55854 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SUMO3P55854 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.43■□□□□ 0.86
SUMO3P55854 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.43■□□□□ 0.86
SUMO3P55854 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.43■□□□□ 0.86
SUMO3P55854 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SUMO3P55854 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.43■□□□□ 0.86
SUMO3P55854 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 AC079630.1-202ENST00000618127 1840 ntBASIC20.43■□□□□ 0.86
SUMO3P55854 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUMO3P55854 C17orf82-201ENST00000623772 1530 ntBASIC20.43■□□□□ 0.86
SUMO3P55854 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.42■□□□□ 0.86
SUMO3P55854 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
SUMO3P55854 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SUMO3P55854 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.42■□□□□ 0.86
SUMO3P55854 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.42■□□□□ 0.86
SUMO3P55854 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.42■□□□□ 0.86
SUMO3P55854 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.42■□□□□ 0.86
SUMO3P55854 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUMO3P55854 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.42■□□□□ 0.86
SUMO3P55854 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms