Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PSMD4P55036 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PSMD4P55036 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PSMD4P55036 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.95■□□□□ 0.94
PSMD4P55036 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 GUSBP5-201ENST00000418136 578 ntBASIC20.95■□□□□ 0.94
PSMD4P55036 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSMD4P55036 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.95■□□□□ 0.94
PSMD4P55036 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.94■□□□□ 0.94
PSMD4P55036 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.94■□□□□ 0.94
PSMD4P55036 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSMD4P55036 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
PSMD4P55036 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PSMD4P55036 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.93■□□□□ 0.94
PSMD4P55036 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
PSMD4P55036 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PSMD4P55036 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PSMD4P55036 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PSMD4P55036 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PSMD4P55036 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSMD4P55036 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSMD4P55036 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PSMD4P55036 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PSMD4P55036 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PSMD4P55036 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSMD4P55036 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.92■□□□□ 0.94
PSMD4P55036 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSMD4P55036 KRT16P3-201ENST00000439127 1283 ntBASIC20.92■□□□□ 0.94
PSMD4P55036 UNC93B8-201ENST00000511903 705 ntBASIC20.92■□□□□ 0.94
PSMD4P55036 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PSMD4P55036 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSMD4P55036 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.91■□□□□ 0.94
PSMD4P55036 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PSMD4P55036 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSMD4P55036 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
PSMD4P55036 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PSMD4P55036 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.9■□□□□ 0.94
PSMD4P55036 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSMD4P55036 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSMD4P55036 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.9■□□□□ 0.94
PSMD4P55036 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.9■□□□□ 0.94
PSMD4P55036 MIR6724-1-201ENST00000616420 92 ntBASIC20.9■□□□□ 0.94
PSMD4P55036 MIR6724-2-201ENST00000616483 92 ntBASIC20.9■□□□□ 0.94
PSMD4P55036 MIR6724-4-201ENST00000617390 92 ntBASIC20.9■□□□□ 0.94
PSMD4P55036 MIR6724-3-201ENST00000622482 92 ntBASIC20.9■□□□□ 0.94
PSMD4P55036 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSMD4P55036 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PSMD4P55036 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSMD4P55036 DUSP8P5-201ENST00000422884 1815 ntBASIC20.9■□□□□ 0.94
PSMD4P55036 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.9■□□□□ 0.94
PSMD4P55036 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PSMD4P55036 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PSMD4P55036 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PSMD4P55036 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PSMD4P55036 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PSMD4P55036 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PSMD4P55036 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PSMD4P55036 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.88■□□□□ 0.93
PSMD4P55036 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PSMD4P55036 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PSMD4P55036 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
PSMD4P55036 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.88■□□□□ 0.93
PSMD4P55036 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.88■□□□□ 0.93
PSMD4P55036 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PSMD4P55036 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
PSMD4P55036 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PSMD4P55036 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.87■□□□□ 0.93
PSMD4P55036 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PSMD4P55036 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.87■□□□□ 0.93
PSMD4P55036 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PSMD4P55036 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms