Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.85■□□□□ 0.77
HCFC1P51610 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HCFC1P51610 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HCFC1P51610 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1P51610 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1P51610 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
HCFC1P51610 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
HCFC1P51610 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC1P51610 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1P51610 AC145676.1-201ENST00000514988 2004 ntBASIC19.83■□□□□ 0.77
HCFC1P51610 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1P51610 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1P51610 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.83■□□□□ 0.77
HCFC1P51610 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.83■□□□□ 0.77
HCFC1P51610 MIR3181-201ENST00000578512 73 ntBASIC19.83■□□□□ 0.77
HCFC1P51610 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC1P51610 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HCFC1P51610 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1P51610 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1P51610 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1P51610 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1P51610 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.83■□□□□ 0.76
HCFC1P51610 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.83■□□□□ 0.76
HCFC1P51610 AC022517.1-201ENST00000592429 346 ntBASIC19.83■□□□□ 0.76
HCFC1P51610 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.83■□□□□ 0.76
HCFC1P51610 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1P51610 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.82■□□□□ 0.76
HCFC1P51610 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
HCFC1P51610 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1P51610 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1P51610 AC009086.3-201ENST00000623486 1008 ntBASIC19.82■□□□□ 0.76
HCFC1P51610 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1P51610 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.82■□□□□ 0.76
HCFC1P51610 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCFC1P51610 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.81■□□□□ 0.76
HCFC1P51610 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCFC1P51610 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCFC1P51610 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCFC1P51610 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.81■□□□□ 0.76
HCFC1P51610 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.81■□□□□ 0.76
HCFC1P51610 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.81■□□□□ 0.76
HCFC1P51610 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.81■□□□□ 0.76
HCFC1P51610 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.81■□□□□ 0.76
HCFC1P51610 AC092437.1-201ENST00000624794 1048 ntBASIC19.81■□□□□ 0.76
HCFC1P51610 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.8■□□□□ 0.76
HCFC1P51610 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HCFC1P51610 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HCFC1P51610 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.8■□□□□ 0.76
HCFC1P51610 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCFC1P51610 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.8■□□□□ 0.76
HCFC1P51610 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.8■□□□□ 0.76
HCFC1P51610 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.8■□□□□ 0.76
HCFC1P51610 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCFC1P51610 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.79■□□□□ 0.76
HCFC1P51610 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HCFC1P51610 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.79■□□□□ 0.76
HCFC1P51610 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.79■□□□□ 0.76
HCFC1P51610 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.79■□□□□ 0.76
HCFC1P51610 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCFC1P51610 TSPY26P-201ENST00000476365 1326 ntBASIC19.79■□□□□ 0.76
HCFC1P51610 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.79■□□□□ 0.76
HCFC1P51610 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HCFC1P51610 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.78■□□□□ 0.76
HCFC1P51610 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCFC1P51610 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCFC1P51610 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCFC1P51610 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.78■□□□□ 0.76
HCFC1P51610 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
HCFC1P51610 MIR572-201ENST00000384983 95 ntBASIC19.78■□□□□ 0.76
HCFC1P51610 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HCFC1P51610 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCFC1P51610 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1P51610 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1P51610 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1P51610 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
HCFC1P51610 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1P51610 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.77■□□□□ 0.76
HCFC1P51610 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.77■□□□□ 0.76
HCFC1P51610 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HCFC1P51610 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
HCFC1P51610 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HCFC1P51610 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HCFC1P51610 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
HCFC1P51610 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.76■□□□□ 0.75
HCFC1P51610 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 AL358852.1-201ENST00000623174 1268 ntBASIC19.76■□□□□ 0.75
HCFC1P51610 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HCFC1P51610 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 AC123595.1-201ENST00000440769 1046 ntBASIC19.76■□□□□ 0.75
HCFC1P51610 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms