Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.63■□□□□ 0.73
GSK3AP49840 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.63■□□□□ 0.73
GSK3AP49840 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GSK3AP49840 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 C9orf163-202ENST00000624034 2573 ntBASIC19.63■□□□□ 0.73
GSK3AP49840 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.63■□□□□ 0.73
GSK3AP49840 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.63■□□□□ 0.73
GSK3AP49840 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GSK3AP49840 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.62■□□□□ 0.73
GSK3AP49840 CLDN5-201ENST00000403084 2357 ntBASIC19.62■□□□□ 0.73
GSK3AP49840 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GSK3AP49840 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GSK3AP49840 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GSK3AP49840 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.62■□□□□ 0.73
GSK3AP49840 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GSK3AP49840 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GSK3AP49840 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GSK3AP49840 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GSK3AP49840 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GSK3AP49840 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.61■□□□□ 0.73
GSK3AP49840 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.61■□□□□ 0.73
GSK3AP49840 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.61■□□□□ 0.73
GSK3AP49840 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GSK3AP49840 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GSK3AP49840 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GSK3AP49840 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.61■□□□□ 0.73
GSK3AP49840 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GSK3AP49840 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.6■□□□□ 0.73
GSK3AP49840 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.6■□□□□ 0.73
GSK3AP49840 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.6■□□□□ 0.73
GSK3AP49840 AC137630.3-201ENST00000607245 391 ntBASIC19.6■□□□□ 0.73
GSK3AP49840 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.6■□□□□ 0.73
GSK3AP49840 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
GSK3AP49840 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GSK3AP49840 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GSK3AP49840 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GSK3AP49840 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GSK3AP49840 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.59■□□□□ 0.73
GSK3AP49840 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.59■□□□□ 0.73
GSK3AP49840 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GSK3AP49840 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
GSK3AP49840 AC092068.2-201ENST00000590491 1708 ntBASIC19.59■□□□□ 0.73
GSK3AP49840 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GSK3AP49840 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
GSK3AP49840 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.58■□□□□ 0.73
GSK3AP49840 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GSK3AP49840 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.58■□□□□ 0.72
GSK3AP49840 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GSK3AP49840 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GSK3AP49840 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GSK3AP49840 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GSK3AP49840 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GSK3AP49840 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
GSK3AP49840 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GSK3AP49840 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.57■□□□□ 0.72
GSK3AP49840 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.57■□□□□ 0.72
GSK3AP49840 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
GSK3AP49840 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GSK3AP49840 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GSK3AP49840 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GSK3AP49840 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GSK3AP49840 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.57■□□□□ 0.72
GSK3AP49840 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GSK3AP49840 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.56■□□□□ 0.72
GSK3AP49840 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GSK3AP49840 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.56■□□□□ 0.72
GSK3AP49840 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GSK3AP49840 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.56■□□□□ 0.72
GSK3AP49840 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.56■□□□□ 0.72
GSK3AP49840 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.56■□□□□ 0.72
GSK3AP49840 DUSP8P3-201ENST00000399571 1760 ntBASIC19.56■□□□□ 0.72
GSK3AP49840 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.56■□□□□ 0.72
GSK3AP49840 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GSK3AP49840 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GSK3AP49840 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms