Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF4P48230 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF4P48230 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.3■■□□□ 1.8
TM4SF4P48230 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.3■■□□□ 1.8
TM4SF4P48230 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.3■■□□□ 1.8
TM4SF4P48230 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF4P48230 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.3■■□□□ 1.8
TM4SF4P48230 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.3■■□□□ 1.8
TM4SF4P48230 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF4P48230 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF4P48230 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF4P48230 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF4P48230 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
TM4SF4P48230 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.29■■□□□ 1.8
TM4SF4P48230 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.29■■□□□ 1.8
TM4SF4P48230 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.29■■□□□ 1.8
TM4SF4P48230 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.29■■□□□ 1.8
TM4SF4P48230 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF4P48230 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF4P48230 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
TM4SF4P48230 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TM4SF4P48230 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.28■■□□□ 1.8
TM4SF4P48230 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.28■■□□□ 1.8
TM4SF4P48230 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TM4SF4P48230 AC026185.1-201ENST00000445748 174 ntBASIC26.28■■□□□ 1.8
TM4SF4P48230 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF4P48230 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.28■■□□□ 1.8
TM4SF4P48230 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TM4SF4P48230 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.27■■□□□ 1.8
TM4SF4P48230 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.27■■□□□ 1.8
TM4SF4P48230 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
TM4SF4P48230 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TM4SF4P48230 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.27■■□□□ 1.8
TM4SF4P48230 AC010501.1-201ENST00000606270 1962 ntBASIC26.26■■□□□ 1.79
TM4SF4P48230 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.26■■□□□ 1.79
TM4SF4P48230 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TM4SF4P48230 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.26■■□□□ 1.79
TM4SF4P48230 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TM4SF4P48230 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TM4SF4P48230 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.26■■□□□ 1.79
TM4SF4P48230 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TM4SF4P48230 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TM4SF4P48230 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.26■■□□□ 1.79
TM4SF4P48230 KRT18P61-201ENST00000585825 1298 ntBASIC26.26■■□□□ 1.79
TM4SF4P48230 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TM4SF4P48230 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TM4SF4P48230 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TM4SF4P48230 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TM4SF4P48230 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.25■■□□□ 1.79
TM4SF4P48230 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TM4SF4P48230 AC016769.1-201ENST00000409132 1010 ntBASIC26.24■■□□□ 1.79
TM4SF4P48230 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.24■■□□□ 1.79
TM4SF4P48230 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TM4SF4P48230 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.24■■□□□ 1.79
TM4SF4P48230 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.23■■□□□ 1.79
TM4SF4P48230 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TM4SF4P48230 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TM4SF4P48230 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.23■■□□□ 1.79
TM4SF4P48230 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TM4SF4P48230 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TM4SF4P48230 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.23■■□□□ 1.79
TM4SF4P48230 AC137761.2-201ENST00000561729 223 ntBASIC26.23■■□□□ 1.79
TM4SF4P48230 AC145350.3-201ENST00000569033 163 ntBASIC26.23■■□□□ 1.79
TM4SF4P48230 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TM4SF4P48230 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
TM4SF4P48230 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TM4SF4P48230 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
TM4SF4P48230 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.22■■□□□ 1.79
TM4SF4P48230 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.22■■□□□ 1.79
TM4SF4P48230 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TM4SF4P48230 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
TM4SF4P48230 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.21■■□□□ 1.79
TM4SF4P48230 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TM4SF4P48230 AC091060.1-201ENST00000623524 1766 ntBASIC26.21■■□□□ 1.79
TM4SF4P48230 AC133637.1-201ENST00000624115 1537 ntBASIC26.21■■□□□ 1.79
TM4SF4P48230 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TM4SF4P48230 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TM4SF4P48230 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TM4SF4P48230 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.21■■□□□ 1.79
TM4SF4P48230 AL109923.1-201ENST00000618799 583 ntBASIC26.21■■□□□ 1.79
TM4SF4P48230 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TM4SF4P48230 AC142086.6-201ENST00000621154 1765 ntBASIC26.2■■□□□ 1.79
TM4SF4P48230 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms