Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 DUX4L19-201ENST00000557448 1267 ntBASIC21.54■■□□□ 1.04
GABRA4P48169 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
GABRA4P48169 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GABRA4P48169 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABRA4P48169 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GABRA4P48169 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.53■■□□□ 1.04
GABRA4P48169 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.53■■□□□ 1.04
GABRA4P48169 AL031432.3-201ENST00000607698 485 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 AC092171.4-201ENST00000609130 632 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 AC005837.3-201ENST00000612163 286 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.53■■□□□ 1.04
GABRA4P48169 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.53■■□□□ 1.04
GABRA4P48169 AC241377.3-202ENST00000626088 1088 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 AC241585.3-202ENST00000628937 1088 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 AC245100.8-202ENST00000629247 1058 ntBASIC21.53■■□□□ 1.04
GABRA4P48169 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.53■■□□□ 1.04
GABRA4P48169 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABRA4P48169 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABRA4P48169 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABRA4P48169 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
GABRA4P48169 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
GABRA4P48169 AC006455.2-201ENST00000429931 906 ntBASIC21.52■■□□□ 1.04
GABRA4P48169 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABRA4P48169 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.52■■□□□ 1.04
GABRA4P48169 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.52■■□□□ 1.04
GABRA4P48169 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
GABRA4P48169 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GABRA4P48169 AC135279.3-201ENST00000610945 1311 ntBASIC21.52■■□□□ 1.03
GABRA4P48169 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GABRA4P48169 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABRA4P48169 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABRA4P48169 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GABRA4P48169 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.51■■□□□ 1.03
GABRA4P48169 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABRA4P48169 SYT6-210ENST00000641643 1587 ntBASIC21.51■■□□□ 1.03
GABRA4P48169 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GABRA4P48169 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABRA4P48169 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.5■■□□□ 1.03
GABRA4P48169 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.5■■□□□ 1.03
GABRA4P48169 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GABRA4P48169 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GABRA4P48169 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GABRA4P48169 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.49■■□□□ 1.03
GABRA4P48169 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GABRA4P48169 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.49■■□□□ 1.03
GABRA4P48169 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
GABRA4P48169 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.49■■□□□ 1.03
GABRA4P48169 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.49■■□□□ 1.03
GABRA4P48169 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GABRA4P48169 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GABRA4P48169 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GABRA4P48169 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
GABRA4P48169 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GABRA4P48169 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABRA4P48169 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
GABRA4P48169 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.48■■□□□ 1.03
GABRA4P48169 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.48■■□□□ 1.03
GABRA4P48169 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABRA4P48169 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.47■■□□□ 1.03
GABRA4P48169 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GABRA4P48169 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.47■■□□□ 1.03
GABRA4P48169 SUDS3P1-201ENST00000505831 966 ntBASIC21.47■■□□□ 1.03
GABRA4P48169 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.47■■□□□ 1.03
GABRA4P48169 AL138724.1-201ENST00000606771 1088 ntBASIC21.47■■□□□ 1.03
GABRA4P48169 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GABRA4P48169 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GABRA4P48169 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GABRA4P48169 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.46■■□□□ 1.03
GABRA4P48169 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 AC011298.3-201ENST00000615796 283 ntBASIC21.46■■□□□ 1.03
GABRA4P48169 AC009086.3-201ENST00000623486 1008 ntBASIC21.46■■□□□ 1.03
GABRA4P48169 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.46■■□□□ 1.03
GABRA4P48169 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABRA4P48169 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
GABRA4P48169 EDA-201ENST00000338901 1233 ntBASIC21.45■■□□□ 1.02
GABRA4P48169 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.45■■□□□ 1.02
GABRA4P48169 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.45■■□□□ 1.02
GABRA4P48169 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.45■■□□□ 1.02
GABRA4P48169 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.45■■□□□ 1.02
GABRA4P48169 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.45■■□□□ 1.02
GABRA4P48169 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
GABRA4P48169 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GABRA4P48169 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GABRA4P48169 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
GABRA4P48169 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GABRA4P48169 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.44■■□□□ 1.02
GABRA4P48169 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
GABRA4P48169 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.44■■□□□ 1.02
GABRA4P48169 MIR3181-201ENST00000578512 73 ntBASIC21.44■■□□□ 1.02
GABRA4P48169 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms