Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHAP31040 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHAP31040 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAP31040 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SDHAP31040 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.21■□□□□ 0.83
SDHAP31040 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 AC103724.3-201ENST00000564481 992 ntBASIC20.21■□□□□ 0.83
SDHAP31040 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.21■□□□□ 0.83
SDHAP31040 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SDHAP31040 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAP31040 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SDHAP31040 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.2■□□□□ 0.82
SDHAP31040 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 KRT8P33-201ENST00000508125 1423 ntBASIC20.2■□□□□ 0.82
SDHAP31040 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SDHAP31040 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAP31040 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAP31040 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAP31040 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SDHAP31040 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.19■□□□□ 0.82
SDHAP31040 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAP31040 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAP31040 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAP31040 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.19■□□□□ 0.82
SDHAP31040 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SDHAP31040 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHAP31040 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SDHAP31040 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.18■□□□□ 0.82
SDHAP31040 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHAP31040 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAP31040 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SDHAP31040 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SDHAP31040 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
SDHAP31040 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.17■□□□□ 0.82
SDHAP31040 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.17■□□□□ 0.82
SDHAP31040 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SDHAP31040 AC079630.1-202ENST00000618127 1840 ntBASIC20.17■□□□□ 0.82
SDHAP31040 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.17■□□□□ 0.82
SDHAP31040 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAP31040 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SDHAP31040 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.17■□□□□ 0.82
SDHAP31040 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAP31040 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAP31040 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.16■□□□□ 0.82
SDHAP31040 SNX5-217ENST00000606557 1087 ntBASIC20.16■□□□□ 0.82
SDHAP31040 AC137630.3-201ENST00000607245 391 ntBASIC20.16■□□□□ 0.82
SDHAP31040 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SDHAP31040 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
SDHAP31040 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAP31040 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
SDHAP31040 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAP31040 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.15■□□□□ 0.82
SDHAP31040 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SDHAP31040 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SDHAP31040 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHAP31040 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms