Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL161729.1-201ENST00000604104 1402 ntBASIC21.6■■□□□ 1.05
HTR1EP28566 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR1EP28566 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR1EP28566 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR1EP28566 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
HTR1EP28566 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HTR1EP28566 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HTR1EP28566 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HTR1EP28566 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
HTR1EP28566 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR1EP28566 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HTR1EP28566 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR1EP28566 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.59■■□□□ 1.05
HTR1EP28566 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.59■■□□□ 1.05
HTR1EP28566 AC019171.1-201ENST00000601251 1056 ntBASIC21.59■■□□□ 1.05
HTR1EP28566 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.59■■□□□ 1.05
HTR1EP28566 C1orf229-201ENST00000623686 2258 ntBASIC21.59■■□□□ 1.05
HTR1EP28566 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR1EP28566 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.58■■□□□ 1.05
HTR1EP28566 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HTR1EP28566 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HTR1EP28566 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
HTR1EP28566 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
HTR1EP28566 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HTR1EP28566 Z92544.1-202ENST00000571933 1220 ntBASIC21.58■■□□□ 1.05
HTR1EP28566 LINC00565-201ENST00000562710 2331 ntBASIC21.58■■□□□ 1.04
HTR1EP28566 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR1EP28566 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HTR1EP28566 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HTR1EP28566 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.57■■□□□ 1.04
HTR1EP28566 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.57■■□□□ 1.04
HTR1EP28566 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HTR1EP28566 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR1EP28566 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR1EP28566 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
HTR1EP28566 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR1EP28566 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.57■■□□□ 1.04
HTR1EP28566 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.56■■□□□ 1.04
HTR1EP28566 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.56■■□□□ 1.04
HTR1EP28566 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.56■■□□□ 1.04
HTR1EP28566 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.56■■□□□ 1.04
HTR1EP28566 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HTR1EP28566 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HTR1EP28566 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HTR1EP28566 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR1EP28566 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR1EP28566 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR1EP28566 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR1EP28566 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.55■■□□□ 1.04
HTR1EP28566 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR1EP28566 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.54■■□□□ 1.04
HTR1EP28566 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR1EP28566 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.54■■□□□ 1.04
HTR1EP28566 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HTR1EP28566 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
HTR1EP28566 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR1EP28566 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR1EP28566 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.54■■□□□ 1.04
HTR1EP28566 LINC00526-201ENST00000581067 1875 ntBASIC21.54■■□□□ 1.04
HTR1EP28566 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HTR1EP28566 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
HTR1EP28566 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTR1EP28566 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HTR1EP28566 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.53■■□□□ 1.04
HTR1EP28566 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.53■■□□□ 1.04
HTR1EP28566 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
HTR1EP28566 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR1EP28566 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR1EP28566 AC090877.2-201ENST00000558441 1738 ntBASIC21.52■■□□□ 1.04
HTR1EP28566 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.52■■□□□ 1.04
HTR1EP28566 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR1EP28566 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR1EP28566 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.52■■□□□ 1.04
HTR1EP28566 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.52■■□□□ 1.04
HTR1EP28566 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.52■■□□□ 1.04
HTR1EP28566 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
HTR1EP28566 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HTR1EP28566 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HTR1EP28566 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.52■■□□□ 1.03
HTR1EP28566 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
HTR1EP28566 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR1EP28566 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR1EP28566 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR1EP28566 AC087393.1-201ENST00000582896 145 ntBASIC21.51■■□□□ 1.03
HTR1EP28566 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.51■■□□□ 1.03
HTR1EP28566 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTR1EP28566 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTR1EP28566 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms