Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GDF1P27539 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF1P27539 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GDF1P27539 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF1P27539 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.5■□□□□ 0.87
GDF1P27539 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.5■□□□□ 0.87
GDF1P27539 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.5■□□□□ 0.87
GDF1P27539 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDF1P27539 SYT6-210ENST00000641643 1587 ntBASIC20.5■□□□□ 0.87
GDF1P27539 AC135279.3-201ENST00000610945 1311 ntBASIC20.5■□□□□ 0.87
GDF1P27539 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF1P27539 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.5■□□□□ 0.87
GDF1P27539 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
GDF1P27539 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF1P27539 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.49■□□□□ 0.87
GDF1P27539 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
GDF1P27539 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF1P27539 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF1P27539 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.48■□□□□ 0.87
GDF1P27539 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF1P27539 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF1P27539 AC106739.1-201ENST00000617035 715 ntBASIC20.48■□□□□ 0.87
GDF1P27539 AC241377.3-202ENST00000626088 1088 ntBASIC20.48■□□□□ 0.87
GDF1P27539 AC241585.3-202ENST00000628937 1088 ntBASIC20.48■□□□□ 0.87
GDF1P27539 AC245100.8-202ENST00000629247 1058 ntBASIC20.48■□□□□ 0.87
GDF1P27539 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF1P27539 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.47■□□□□ 0.87
GDF1P27539 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
GDF1P27539 AC024257.2-201ENST00000549699 147 ntBASIC20.47■□□□□ 0.87
GDF1P27539 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GDF1P27539 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.47■□□□□ 0.87
GDF1P27539 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
GDF1P27539 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF1P27539 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF1P27539 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF1P27539 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF1P27539 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.46■□□□□ 0.87
GDF1P27539 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.46■□□□□ 0.87
GDF1P27539 AC009086.3-201ENST00000623486 1008 ntBASIC20.46■□□□□ 0.87
GDF1P27539 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDF1P27539 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GDF1P27539 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF1P27539 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GDF1P27539 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF1P27539 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GDF1P27539 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.45■□□□□ 0.86
GDF1P27539 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.45■□□□□ 0.86
GDF1P27539 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.45■□□□□ 0.86
GDF1P27539 AC133561.4-201ENST00000566112 224 ntBASIC20.45■□□□□ 0.86
GDF1P27539 AC005837.3-201ENST00000612163 286 ntBASIC20.45■□□□□ 0.86
GDF1P27539 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.45■□□□□ 0.86
GDF1P27539 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF1P27539 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF1P27539 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
GDF1P27539 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GDF1P27539 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
GDF1P27539 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF1P27539 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
GDF1P27539 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
GDF1P27539 AC004812.2-201ENST00000611079 2094 ntBASIC20.44■□□□□ 0.86
GDF1P27539 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF1P27539 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GDF1P27539 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF1P27539 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.43■□□□□ 0.86
GDF1P27539 SERBP1P1-201ENST00000396021 1160 ntBASIC20.43■□□□□ 0.86
GDF1P27539 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
GDF1P27539 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.43■□□□□ 0.86
GDF1P27539 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.43■□□□□ 0.86
GDF1P27539 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF1P27539 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF1P27539 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GDF1P27539 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.42■□□□□ 0.86
GDF1P27539 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms