Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 AC092171.4-201ENST00000609130 632 ntBASIC19.12■□□□□ 0.65
TNFRSF1AP19438 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1AP19438 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 MIR4466-201ENST00000606121 54 ntBASIC19.1■□□□□ 0.65
TNFRSF1AP19438 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.1■□□□□ 0.65
TNFRSF1AP19438 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1AP19438 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF1AP19438 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.08■□□□□ 0.65
TNFRSF1AP19438 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.08■□□□□ 0.65
TNFRSF1AP19438 ABCB10P4-201ENST00000566803 2184 ntBASIC19.08■□□□□ 0.65
TNFRSF1AP19438 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1AP19438 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1AP19438 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1AP19438 AC241377.3-202ENST00000626088 1088 ntBASIC19.08■□□□□ 0.64
TNFRSF1AP19438 AC241585.3-202ENST00000628937 1088 ntBASIC19.08■□□□□ 0.64
TNFRSF1AP19438 AC245100.8-202ENST00000629247 1058 ntBASIC19.08■□□□□ 0.64
TNFRSF1AP19438 C17orf82-201ENST00000623772 1530 ntBASIC19.08■□□□□ 0.64
TNFRSF1AP19438 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1AP19438 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1AP19438 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 DUX4L19-201ENST00000557448 1267 ntBASIC19.07■□□□□ 0.64
TNFRSF1AP19438 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1AP19438 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1AP19438 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.05■□□□□ 0.64
TNFRSF1AP19438 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1AP19438 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1AP19438 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1AP19438 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms