Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
ATF3P18847 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ATF3P18847 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.58■■■□□ 2.65
ATF3P18847 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.58■■■□□ 2.65
ATF3P18847 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
ATF3P18847 AC142086.6-201ENST00000621154 1765 ntBASIC31.58■■■□□ 2.65
ATF3P18847 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.58■■■□□ 2.65
ATF3P18847 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.57■■■□□ 2.64
ATF3P18847 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.57■■■□□ 2.64
ATF3P18847 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.57■■■□□ 2.64
ATF3P18847 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ATF3P18847 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.57■■■□□ 2.64
ATF3P18847 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
ATF3P18847 AC073111.5-205ENST00000641717 521 ntBASIC31.57■■■□□ 2.64
ATF3P18847 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ATF3P18847 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ATF3P18847 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ATF3P18847 AC141586.4-201ENST00000624558 1573 ntBASIC31.56■■■□□ 2.64
ATF3P18847 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
ATF3P18847 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.56■■■□□ 2.64
ATF3P18847 AC104771.1-201ENST00000603335 964 ntBASIC31.56■■■□□ 2.64
ATF3P18847 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.56■■■□□ 2.64
ATF3P18847 NT5C3AP1-201ENST00000394500 1012 ntBASIC31.55■■■□□ 2.64
ATF3P18847 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
ATF3P18847 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ATF3P18847 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.55■■■□□ 2.64
ATF3P18847 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.55■■■□□ 2.64
ATF3P18847 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ATF3P18847 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ATF3P18847 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
ATF3P18847 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.54■■■□□ 2.64
ATF3P18847 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.54■■■□□ 2.64
ATF3P18847 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.54■■■□□ 2.64
ATF3P18847 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
ATF3P18847 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ATF3P18847 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
ATF3P18847 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.54■■■□□ 2.64
ATF3P18847 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ATF3P18847 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
ATF3P18847 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.53■■■□□ 2.64
ATF3P18847 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.53■■■□□ 2.64
ATF3P18847 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.53■■■□□ 2.64
ATF3P18847 AC016769.1-201ENST00000409132 1010 ntBASIC31.53■■■□□ 2.64
ATF3P18847 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ATF3P18847 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.52■■■□□ 2.64
ATF3P18847 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.52■■■□□ 2.64
ATF3P18847 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
ATF3P18847 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.52■■■□□ 2.64
ATF3P18847 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 TMEM191A-211ENST00000637163 1067 ntBASIC31.52■■■□□ 2.64
ATF3P18847 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.52■■■□□ 2.64
ATF3P18847 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.52■■■□□ 2.64
ATF3P18847 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
ATF3P18847 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ATF3P18847 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.51■■■□□ 2.64
ATF3P18847 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.51■■■□□ 2.63
ATF3P18847 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
ATF3P18847 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
ATF3P18847 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
ATF3P18847 AC137761.2-201ENST00000561729 223 ntBASIC31.51■■■□□ 2.63
ATF3P18847 AC145350.3-201ENST00000569033 163 ntBASIC31.51■■■□□ 2.63
ATF3P18847 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.51■■■□□ 2.63
ATF3P18847 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
ATF3P18847 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
ATF3P18847 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.5■■■□□ 2.63
ATF3P18847 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
ATF3P18847 AC026185.1-201ENST00000445748 174 ntBASIC31.5■■■□□ 2.63
ATF3P18847 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.5■■■□□ 2.63
ATF3P18847 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
ATF3P18847 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.5■■■□□ 2.63
ATF3P18847 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ATF3P18847 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ATF3P18847 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ATF3P18847 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.49■■■□□ 2.63
ATF3P18847 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.49■■■□□ 2.63
ATF3P18847 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ATF3P18847 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATF3P18847 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
ATF3P18847 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.48■■■□□ 2.63
ATF3P18847 KRT18P61-201ENST00000585825 1298 ntBASIC31.48■■■□□ 2.63
ATF3P18847 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.48■■■□□ 2.63
ATF3P18847 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ATF3P18847 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
ATF3P18847 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ATF3P18847 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ATF3P18847 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
ATF3P18847 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.47■■■□□ 2.63
ATF3P18847 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ATF3P18847 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.47■■■□□ 2.63
ATF3P18847 AC133637.1-201ENST00000624115 1537 ntBASIC31.47■■■□□ 2.63
ATF3P18847 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
ATF3P18847 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.46■■■□□ 2.63
ATF3P18847 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
ATF3P18847 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
ATF3P18847 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms