Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.8■□□□□ 0.92
PEPDP12955 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PEPDP12955 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PEPDP12955 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.79■□□□□ 0.92
PEPDP12955 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PEPDP12955 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.79■□□□□ 0.92
PEPDP12955 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.79■□□□□ 0.92
PEPDP12955 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.79■□□□□ 0.92
PEPDP12955 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.79■□□□□ 0.92
PEPDP12955 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.79■□□□□ 0.92
PEPDP12955 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.79■□□□□ 0.92
PEPDP12955 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PEPDP12955 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEPDP12955 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PEPDP12955 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.78■□□□□ 0.92
PEPDP12955 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PEPDP12955 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.78■□□□□ 0.92
PEPDP12955 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.78■□□□□ 0.92
PEPDP12955 AC004448.1-201ENST00000458332 883 ntBASIC20.78■□□□□ 0.92
PEPDP12955 MIR6722-201ENST00000617286 78 ntBASIC20.78■□□□□ 0.92
PEPDP12955 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.78■□□□□ 0.92
PEPDP12955 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
PEPDP12955 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PEPDP12955 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PEPDP12955 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEPDP12955 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.77■□□□□ 0.92
PEPDP12955 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEPDP12955 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PEPDP12955 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PEPDP12955 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.77■□□□□ 0.92
PEPDP12955 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEPDP12955 MIR6724-1-201ENST00000616420 92 ntBASIC20.77■□□□□ 0.92
PEPDP12955 MIR6724-2-201ENST00000616483 92 ntBASIC20.77■□□□□ 0.92
PEPDP12955 MIR6724-4-201ENST00000617390 92 ntBASIC20.77■□□□□ 0.92
PEPDP12955 MIR6724-3-201ENST00000622482 92 ntBASIC20.77■□□□□ 0.92
PEPDP12955 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PEPDP12955 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEPDP12955 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PEPDP12955 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PEPDP12955 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PEPDP12955 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PEPDP12955 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.76■□□□□ 0.91
PEPDP12955 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
PEPDP12955 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.76■□□□□ 0.91
PEPDP12955 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.76■□□□□ 0.91
PEPDP12955 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PEPDP12955 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEPDP12955 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.75■□□□□ 0.91
PEPDP12955 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEPDP12955 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PEPDP12955 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PEPDP12955 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PEPDP12955 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.75■□□□□ 0.91
PEPDP12955 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.75■□□□□ 0.91
PEPDP12955 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.74■□□□□ 0.91
PEPDP12955 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.74■□□□□ 0.91
PEPDP12955 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PEPDP12955 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEPDP12955 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PEPDP12955 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PEPDP12955 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.73■□□□□ 0.91
PEPDP12955 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.73■□□□□ 0.91
PEPDP12955 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.73■□□□□ 0.91
PEPDP12955 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEPDP12955 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEPDP12955 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms