Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 MIR6089-201ENST00000616698 64 ntBASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNYL3P0C7X3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNYL3P0C7X3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 SYT6-210ENST00000641643 1587 ntBASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNYL3P0C7X3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.64■■□□□ 1.06
CCNYL3P0C7X3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 SUDS3P1-201ENST00000505831 966 ntBASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CCNYL3P0C7X3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCNYL3P0C7X3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 LINC00543-201ENST00000567234 1845 ntBASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNYL3P0C7X3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNYL3P0C7X3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 AL031432.3-201ENST00000607698 485 ntBASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNYL3P0C7X3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms