Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AC129492.7-201ENST00000622992 756 ntBASIC20.21■□□□□ 0.83
MRPL3P09001 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.21■□□□□ 0.83
MRPL3P09001 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPL3P09001 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 RARRES2P2-201ENST00000394842 485 ntBASIC20.2■□□□□ 0.82
MRPL3P09001 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.2■□□□□ 0.82
MRPL3P09001 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MRPL3P09001 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MRPL3P09001 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
MRPL3P09001 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL3P09001 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MRPL3P09001 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPL3P09001 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
MRPL3P09001 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.19■□□□□ 0.82
MRPL3P09001 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.19■□□□□ 0.82
MRPL3P09001 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.19■□□□□ 0.82
MRPL3P09001 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.19■□□□□ 0.82
MRPL3P09001 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL3P09001 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.19■□□□□ 0.82
MRPL3P09001 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.18■□□□□ 0.82
MRPL3P09001 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 LINC00565-201ENST00000562710 2331 ntBASIC20.18■□□□□ 0.82
MRPL3P09001 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
MRPL3P09001 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MRPL3P09001 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MRPL3P09001 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MRPL3P09001 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MRPL3P09001 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MRPL3P09001 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MRPL3P09001 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL3P09001 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 AC011551.1-201ENST00000614101 683 ntBASIC20.17■□□□□ 0.82
MRPL3P09001 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MRPL3P09001 GUSBP5-202ENST00000510805 1989 ntBASIC20.17■□□□□ 0.82
MRPL3P09001 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL3P09001 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
MRPL3P09001 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
MRPL3P09001 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.16■□□□□ 0.82
MRPL3P09001 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.16■□□□□ 0.82
MRPL3P09001 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL3P09001 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MRPL3P09001 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.15■□□□□ 0.82
MRPL3P09001 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.15■□□□□ 0.82
MRPL3P09001 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPL3P09001 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPL3P09001 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
MRPL3P09001 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MRPL3P09001 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
MRPL3P09001 KRT18P60-201ENST00000312876 1297 ntBASIC20.14■□□□□ 0.81
MRPL3P09001 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MRPL3P09001 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MRPL3P09001 PKD1P6-201ENST00000343738 4769 ntBASIC20.14■□□□□ 0.81
MRPL3P09001 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MRPL3P09001 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MRPL3P09001 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MRPL3P09001 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.13■□□□□ 0.81
MRPL3P09001 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.13■□□□□ 0.81
MRPL3P09001 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.13■□□□□ 0.81
MRPL3P09001 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MRPL3P09001 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.13■□□□□ 0.81
MRPL3P09001 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms