Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGN1P05114 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HMGN1P05114 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGN1P05114 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.4■□□□□ 0.86
HMGN1P05114 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HMGN1P05114 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGN1P05114 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGN1P05114 EP400NL-214ENST00000641289 2402 ntBASIC20.39■□□□□ 0.86
HMGN1P05114 GUSBP5-202ENST00000510805 1989 ntBASIC20.39■□□□□ 0.86
HMGN1P05114 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
HMGN1P05114 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGN1P05114 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGN1P05114 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGN1P05114 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGN1P05114 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HMGN1P05114 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGN1P05114 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGN1P05114 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 AC022616.5-201ENST00000518796 181 ntBASIC20.38■□□□□ 0.85
HMGN1P05114 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HMGN1P05114 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 LINC00526-201ENST00000581067 1875 ntBASIC20.38■□□□□ 0.85
HMGN1P05114 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGN1P05114 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGN1P05114 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGN1P05114 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGN1P05114 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGN1P05114 CLDN5-201ENST00000403084 2357 ntBASIC20.37■□□□□ 0.85
HMGN1P05114 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGN1P05114 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGN1P05114 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HMGN1P05114 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
HMGN1P05114 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGN1P05114 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 ECEL1P1-201ENST00000373592 1742 ntBASIC20.36■□□□□ 0.85
HMGN1P05114 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGN1P05114 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 AC127496.7-201ENST00000625110 1798 ntBASIC20.36■□□□□ 0.85
HMGN1P05114 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGN1P05114 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGN1P05114 ESRRAP2-201ENST00000418437 1549 ntBASIC20.35■□□□□ 0.85
HMGN1P05114 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMGN1P05114 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGN1P05114 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HMGN1P05114 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGN1P05114 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HMGN1P05114 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGN1P05114 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGN1P05114 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGN1P05114 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 AC019171.1-201ENST00000601251 1056 ntBASIC20.34■□□□□ 0.85
HMGN1P05114 AC129492.7-201ENST00000622992 756 ntBASIC20.34■□□□□ 0.85
HMGN1P05114 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGN1P05114 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGN1P05114 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HMGN1P05114 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGN1P05114 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGN1P05114 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGN1P05114 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGN1P05114 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HMGN1P05114 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGN1P05114 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms