Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.2■■□□□ 1.78
ALDH1A1P00352 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ALDH1A1P00352 AC016769.1-201ENST00000409132 1010 ntBASIC26.2■■□□□ 1.78
ALDH1A1P00352 CDCA4P2-201ENST00000441182 718 ntBASIC26.2■■□□□ 1.78
ALDH1A1P00352 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.2■■□□□ 1.78
ALDH1A1P00352 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
ALDH1A1P00352 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.19■■□□□ 1.78
ALDH1A1P00352 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.19■■□□□ 1.78
ALDH1A1P00352 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ALDH1A1P00352 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ALDH1A1P00352 AC073111.5-205ENST00000641717 521 ntBASIC26.19■■□□□ 1.78
ALDH1A1P00352 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
ALDH1A1P00352 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.19■■□□□ 1.78
ALDH1A1P00352 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.19■■□□□ 1.78
ALDH1A1P00352 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
ALDH1A1P00352 AC010501.1-201ENST00000606270 1962 ntBASIC26.18■■□□□ 1.78
ALDH1A1P00352 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
ALDH1A1P00352 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ALDH1A1P00352 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
ALDH1A1P00352 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ALDH1A1P00352 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.18■■□□□ 1.78
ALDH1A1P00352 TMEM191A-211ENST00000637163 1067 ntBASIC26.18■■□□□ 1.78
ALDH1A1P00352 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ALDH1A1P00352 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ALDH1A1P00352 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.17■■□□□ 1.78
ALDH1A1P00352 AC026185.1-201ENST00000445748 174 ntBASIC26.17■■□□□ 1.78
ALDH1A1P00352 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.17■■□□□ 1.78
ALDH1A1P00352 AC104771.1-201ENST00000603335 964 ntBASIC26.17■■□□□ 1.78
ALDH1A1P00352 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ALDH1A1P00352 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.16■■□□□ 1.78
ALDH1A1P00352 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
ALDH1A1P00352 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.16■■□□□ 1.78
ALDH1A1P00352 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.16■■□□□ 1.78
ALDH1A1P00352 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ALDH1A1P00352 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.16■■□□□ 1.78
ALDH1A1P00352 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ALDH1A1P00352 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ALDH1A1P00352 AC137761.2-201ENST00000561729 223 ntBASIC26.15■■□□□ 1.78
ALDH1A1P00352 AC145350.3-201ENST00000569033 163 ntBASIC26.15■■□□□ 1.78
ALDH1A1P00352 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.15■■□□□ 1.78
ALDH1A1P00352 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ALDH1A1P00352 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.14■■□□□ 1.78
ALDH1A1P00352 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.14■■□□□ 1.78
ALDH1A1P00352 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ALDH1A1P00352 AC142086.6-201ENST00000621154 1765 ntBASIC26.13■■□□□ 1.77
ALDH1A1P00352 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ALDH1A1P00352 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.13■■□□□ 1.77
ALDH1A1P00352 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ALDH1A1P00352 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
ALDH1A1P00352 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.12■■□□□ 1.77
ALDH1A1P00352 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ALDH1A1P00352 AC133637.1-201ENST00000624115 1537 ntBASIC26.12■■□□□ 1.77
ALDH1A1P00352 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
ALDH1A1P00352 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.12■■□□□ 1.77
ALDH1A1P00352 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
ALDH1A1P00352 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ALDH1A1P00352 AL161729.1-201ENST00000604104 1402 ntBASIC26.11■■□□□ 1.77
ALDH1A1P00352 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ALDH1A1P00352 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
ALDH1A1P00352 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ALDH1A1P00352 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.11■■□□□ 1.77
ALDH1A1P00352 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ALDH1A1P00352 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ALDH1A1P00352 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ALDH1A1P00352 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ALDH1A1P00352 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ALDH1A1P00352 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 MIR6089-201ENST00000616698 64 ntBASIC26.1■■□□□ 1.77
ALDH1A1P00352 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.1■■□□□ 1.77
ALDH1A1P00352 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ALDH1A1P00352 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
ALDH1A1P00352 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms