Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
GGPS1O95749 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.49■■□□□ 1.67
GGPS1O95749 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
GGPS1O95749 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.48■■□□□ 1.67
GGPS1O95749 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.48■■□□□ 1.67
GGPS1O95749 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
GGPS1O95749 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
GGPS1O95749 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.48■■□□□ 1.67
GGPS1O95749 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
GGPS1O95749 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
GGPS1O95749 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.47■■□□□ 1.67
GGPS1O95749 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
GGPS1O95749 AC091305.1-201ENST00000479476 895 ntBASIC25.47■■□□□ 1.67
GGPS1O95749 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.47■■□□□ 1.67
GGPS1O95749 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
GGPS1O95749 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.47■■□□□ 1.67
GGPS1O95749 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.47■■□□□ 1.67
GGPS1O95749 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
GGPS1O95749 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.46■■□□□ 1.67
GGPS1O95749 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
GGPS1O95749 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
GGPS1O95749 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
GGPS1O95749 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.46■■□□□ 1.67
GGPS1O95749 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.46■■□□□ 1.67
GGPS1O95749 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
GGPS1O95749 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
GGPS1O95749 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
GGPS1O95749 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.45■■□□□ 1.66
GGPS1O95749 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.45■■□□□ 1.66
GGPS1O95749 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GGPS1O95749 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
GGPS1O95749 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
GGPS1O95749 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
GGPS1O95749 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.44■■□□□ 1.66
GGPS1O95749 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
GGPS1O95749 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.44■■□□□ 1.66
GGPS1O95749 MIR3181-201ENST00000578512 73 ntBASIC25.44■■□□□ 1.66
GGPS1O95749 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.44■■□□□ 1.66
GGPS1O95749 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.44■■□□□ 1.66
GGPS1O95749 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
GGPS1O95749 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
GGPS1O95749 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
GGPS1O95749 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
GGPS1O95749 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.43■■□□□ 1.66
GGPS1O95749 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.43■■□□□ 1.66
GGPS1O95749 AC136469.2-201ENST00000623944 1028 ntBASIC25.43■■□□□ 1.66
GGPS1O95749 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.43■■□□□ 1.66
GGPS1O95749 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
GGPS1O95749 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
GGPS1O95749 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
GGPS1O95749 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.42■■□□□ 1.66
GGPS1O95749 AC008764.7-201ENST00000593779 1081 ntBASIC25.42■■□□□ 1.66
GGPS1O95749 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.42■■□□□ 1.66
GGPS1O95749 CA15P2-201ENST00000611168 834 ntBASIC25.42■■□□□ 1.66
GGPS1O95749 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
GGPS1O95749 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.42■■□□□ 1.66
GGPS1O95749 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
GGPS1O95749 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GGPS1O95749 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GGPS1O95749 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
GGPS1O95749 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GGPS1O95749 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GGPS1O95749 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.41■■□□□ 1.66
GGPS1O95749 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.41■■□□□ 1.66
GGPS1O95749 AC027682.1-201ENST00000562846 899 ntBASIC25.41■■□□□ 1.66
GGPS1O95749 RARRES2P6-201ENST00000567333 442 ntBASIC25.41■■□□□ 1.66
GGPS1O95749 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
GGPS1O95749 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GGPS1O95749 RASA4CP-201ENST00000424092 1398 ntBASIC25.41■■□□□ 1.66
GGPS1O95749 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
GGPS1O95749 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.4■■□□□ 1.66
GGPS1O95749 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
GGPS1O95749 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.4■■□□□ 1.66
GGPS1O95749 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GGPS1O95749 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
GGPS1O95749 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GGPS1O95749 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
GGPS1O95749 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.39■■□□□ 1.66
GGPS1O95749 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.39■■□□□ 1.66
GGPS1O95749 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GGPS1O95749 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 AC093323.1-202ENST00000635031 2045 ntBASIC25.38■■□□□ 1.65
GGPS1O95749 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
GGPS1O95749 pRNA.6-201ENST00000610482 90 ntBASIC25.38■■□□□ 1.65
GGPS1O95749 pRNA.5-201ENST00000612139 90 ntBASIC25.38■■□□□ 1.65
GGPS1O95749 pRNA.11-201ENST00000618423 90 ntBASIC25.38■■□□□ 1.65
GGPS1O95749 pRNA.13-201ENST00000619112 90 ntBASIC25.38■■□□□ 1.65
GGPS1O95749 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
GGPS1O95749 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms