Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF2O60811 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.2■□□□□ 0.98
PRAMEF2O60811 AC110285.6-201ENST00000617652 491 ntBASIC21.2■□□□□ 0.98
PRAMEF2O60811 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.2■□□□□ 0.98
PRAMEF2O60811 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.2■□□□□ 0.98
PRAMEF2O60811 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF2O60811 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF2O60811 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEF2O60811 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF2O60811 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF2O60811 MIR935-201ENST00000401179 91 ntBASIC21.19■□□□□ 0.98
PRAMEF2O60811 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PRAMEF2O60811 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF2O60811 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PRAMEF2O60811 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRAMEF2O60811 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF2O60811 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF2O60811 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF2O60811 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF2O60811 AC005703.6-201ENST00000623265 1329 ntBASIC21.17■□□□□ 0.98
PRAMEF2O60811 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF2O60811 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF2O60811 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF2O60811 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF2O60811 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF2O60811 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF2O60811 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.16■□□□□ 0.98
PRAMEF2O60811 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF2O60811 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF2O60811 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEF2O60811 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRAMEF2O60811 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
PRAMEF2O60811 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRAMEF2O60811 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF2O60811 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF2O60811 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF2O60811 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.14■□□□□ 0.97
PRAMEF2O60811 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PRAMEF2O60811 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF2O60811 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF2O60811 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRAMEF2O60811 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF2O60811 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.13■□□□□ 0.97
PRAMEF2O60811 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF2O60811 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF2O60811 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF2O60811 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PRAMEF2O60811 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.12■□□□□ 0.97
PRAMEF2O60811 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.12■□□□□ 0.97
PRAMEF2O60811 AC133561.4-201ENST00000566112 224 ntBASIC21.12■□□□□ 0.97
PRAMEF2O60811 AC005837.3-201ENST00000612163 286 ntBASIC21.12■□□□□ 0.97
PRAMEF2O60811 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.12■□□□□ 0.97
PRAMEF2O60811 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
PRAMEF2O60811 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF2O60811 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF2O60811 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF2O60811 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF2O60811 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF2O60811 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF2O60811 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRAMEF2O60811 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms