Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.88■■□□□ 1.09
SDHDO14521 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.88■■□□□ 1.09
SDHDO14521 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SDHDO14521 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
SDHDO14521 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.87■■□□□ 1.09
SDHDO14521 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.87■■□□□ 1.09
SDHDO14521 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHDO14521 AC127496.7-201ENST00000625110 1798 ntBASIC21.87■■□□□ 1.09
SDHDO14521 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SDHDO14521 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.86■■□□□ 1.09
SDHDO14521 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.86■■□□□ 1.09
SDHDO14521 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.86■■□□□ 1.09
SDHDO14521 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.86■■□□□ 1.09
SDHDO14521 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDHDO14521 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SDHDO14521 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.85■■□□□ 1.09
SDHDO14521 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SDHDO14521 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHDO14521 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SDHDO14521 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHDO14521 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHDO14521 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.84■■□□□ 1.09
SDHDO14521 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHDO14521 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SDHDO14521 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDHDO14521 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDHDO14521 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.83■■□□□ 1.09
SDHDO14521 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDHDO14521 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.83■■□□□ 1.09
SDHDO14521 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.83■■□□□ 1.09
SDHDO14521 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SDHDO14521 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDHDO14521 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.83■■□□□ 1.09
SDHDO14521 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SDHDO14521 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SDHDO14521 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SDHDO14521 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDHDO14521 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.82■■□□□ 1.08
SDHDO14521 AC129492.7-201ENST00000622992 756 ntBASIC21.82■■□□□ 1.08
SDHDO14521 AC079630.1-202ENST00000618127 1840 ntBASIC21.82■■□□□ 1.08
SDHDO14521 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.81■■□□□ 1.08
SDHDO14521 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.81■■□□□ 1.08
SDHDO14521 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.81■■□□□ 1.08
SDHDO14521 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.81■■□□□ 1.08
SDHDO14521 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDHDO14521 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SDHDO14521 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.81■■□□□ 1.08
SDHDO14521 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SDHDO14521 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SDHDO14521 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.8■■□□□ 1.08
SDHDO14521 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.8■■□□□ 1.08
SDHDO14521 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
SDHDO14521 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 U85056.1-201ENST00000616429 682 ntBASIC21.8■■□□□ 1.08
SDHDO14521 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHDO14521 ESRRAP2-201ENST00000418437 1549 ntBASIC21.8■■□□□ 1.08
SDHDO14521 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDHDO14521 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDHDO14521 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.79■■□□□ 1.08
SDHDO14521 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.79■■□□□ 1.08
SDHDO14521 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SDHDO14521 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SDHDO14521 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDHDO14521 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 AC137767.1-201ENST00000602918 1920 ntBASIC21.78■■□□□ 1.08
SDHDO14521 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms