Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFA4O00483 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFA4O00483 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFA4O00483 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.34■□□□□ 0.37
NDUFA4O00483 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NDUFA4O00483 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFA4O00483 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA4O00483 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
NDUFA4O00483 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA4O00483 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA4O00483 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA4O00483 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NDUFA4O00483 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFA4O00483 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.33■□□□□ 0.36
NDUFA4O00483 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA4O00483 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA4O00483 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA4O00483 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFA4O00483 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA4O00483 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFA4O00483 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.32■□□□□ 0.36
NDUFA4O00483 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA4O00483 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFA4O00483 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFA4O00483 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFA4O00483 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFA4O00483 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFA4O00483 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFA4O00483 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFA4O00483 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA4O00483 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA4O00483 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA4O00483 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA4O00483 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NDUFA4O00483 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFA4O00483 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NDUFA4O00483 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFA4O00483 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA4O00483 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 UNC93B8-201ENST00000511903 705 ntBASIC17.29■□□□□ 0.36
NDUFA4O00483 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFA4O00483 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NDUFA4O00483 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFA4O00483 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NDUFA4O00483 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFA4O00483 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA4O00483 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA4O00483 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NDUFA4O00483 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.28■□□□□ 0.36
NDUFA4O00483 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA4O00483 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA4O00483 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA4O00483 MIR6724-1-201ENST00000616420 92 ntBASIC17.28■□□□□ 0.36
NDUFA4O00483 MIR6724-2-201ENST00000616483 92 ntBASIC17.28■□□□□ 0.36
NDUFA4O00483 MIR6724-4-201ENST00000617390 92 ntBASIC17.28■□□□□ 0.36
NDUFA4O00483 MIR6724-3-201ENST00000622482 92 ntBASIC17.28■□□□□ 0.36
NDUFA4O00483 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA4O00483 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA4O00483 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA4O00483 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA4O00483 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA4O00483 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA4O00483 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.27■□□□□ 0.36
NDUFA4O00483 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NDUFA4O00483 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA4O00483 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.27■□□□□ 0.36
NDUFA4O00483 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA4O00483 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA4O00483 GUSBP5-201ENST00000418136 578 ntBASIC17.27■□□□□ 0.36
NDUFA4O00483 KRT16P3-201ENST00000439127 1283 ntBASIC17.27■□□□□ 0.36
NDUFA4O00483 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NDUFA4O00483 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA4O00483 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA4O00483 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.27■□□□□ 0.35
NDUFA4O00483 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA4O00483 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
NDUFA4O00483 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA4O00483 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA4O00483 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NDUFA4O00483 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms