Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.4■■□□□ 1.02
PDLIM1O00151 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDLIM1O00151 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.39■■□□□ 1.02
PDLIM1O00151 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDLIM1O00151 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDLIM1O00151 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM1O00151 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDLIM1O00151 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM1O00151 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM1O00151 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.38■■□□□ 1.01
PDLIM1O00151 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM1O00151 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
PDLIM1O00151 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.38■■□□□ 1.01
PDLIM1O00151 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDLIM1O00151 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM1O00151 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM1O00151 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM1O00151 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM1O00151 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PDLIM1O00151 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM1O00151 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDLIM1O00151 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM1O00151 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDLIM1O00151 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDLIM1O00151 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 AC129492.7-201ENST00000622992 756 ntBASIC21.35■■□□□ 1.01
PDLIM1O00151 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 AC092068.2-201ENST00000590491 1708 ntBASIC21.35■■□□□ 1.01
PDLIM1O00151 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM1O00151 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM1O00151 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.34■■□□□ 1.01
PDLIM1O00151 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM1O00151 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.34■■□□□ 1.01
PDLIM1O00151 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PDLIM1O00151 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM1O00151 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PDLIM1O00151 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM1O00151 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM1O00151 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
PDLIM1O00151 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
PDLIM1O00151 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM1O00151 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM1O00151 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
PDLIM1O00151 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.33■■□□□ 1
PDLIM1O00151 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PDLIM1O00151 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDLIM1O00151 AC012354.3-201ENST00000623734 483 ntBASIC21.32■■□□□ 1
PDLIM1O00151 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDLIM1O00151 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms