Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
NACAE9PAV3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NACAE9PAV3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NACAE9PAV3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.36■□□□□ 0.21
NACAE9PAV3 AC239859.2-201ENST00000444165 318 ntBASIC16.36■□□□□ 0.21
NACAE9PAV3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NACAE9PAV3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.35■□□□□ 0.21
NACAE9PAV3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.35■□□□□ 0.21
NACAE9PAV3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
NACAE9PAV3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.35■□□□□ 0.21
NACAE9PAV3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NACAE9PAV3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NACAE9PAV3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NACAE9PAV3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.34■□□□□ 0.21
NACAE9PAV3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NACAE9PAV3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NACAE9PAV3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.34■□□□□ 0.21
NACAE9PAV3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.34■□□□□ 0.21
NACAE9PAV3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NACAE9PAV3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.34■□□□□ 0.21
NACAE9PAV3 THA1P-201ENST00000590384 1145 ntBASIC16.34■□□□□ 0.21
NACAE9PAV3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NACAE9PAV3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NACAE9PAV3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NACAE9PAV3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NACAE9PAV3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
NACAE9PAV3 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.33■□□□□ 0.21
NACAE9PAV3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.33■□□□□ 0.21
NACAE9PAV3 AF131216.4-201ENST00000638924 1588 ntBASIC16.33■□□□□ 0.2
NACAE9PAV3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NACAE9PAV3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.33■□□□□ 0.2
NACAE9PAV3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.33■□□□□ 0.2
NACAE9PAV3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.33■□□□□ 0.2
NACAE9PAV3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NACAE9PAV3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.33■□□□□ 0.2
NACAE9PAV3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NACAE9PAV3 LONRF2P2-201ENST00000439212 571 ntBASIC16.33■□□□□ 0.2
NACAE9PAV3 MIR4787-201ENST00000607364 84 ntBASIC16.33■□□□□ 0.2
NACAE9PAV3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NACAE9PAV3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.32■□□□□ 0.2
NACAE9PAV3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NACAE9PAV3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.32■□□□□ 0.2
NACAE9PAV3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NACAE9PAV3 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.32■□□□□ 0.2
NACAE9PAV3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NACAE9PAV3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NACAE9PAV3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NACAE9PAV3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NACAE9PAV3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.32■□□□□ 0.2
NACAE9PAV3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NACAE9PAV3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.32■□□□□ 0.2
NACAE9PAV3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NACAE9PAV3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.31■□□□□ 0.2
NACAE9PAV3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.31■□□□□ 0.2
NACAE9PAV3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.31■□□□□ 0.2
NACAE9PAV3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 AC092068.2-201ENST00000590491 1708 ntBASIC16.31■□□□□ 0.2
NACAE9PAV3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NACAE9PAV3 KRT18P24-201ENST00000344739 1156 ntBASIC16.31■□□□□ 0.2
NACAE9PAV3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.31■□□□□ 0.2
NACAE9PAV3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.31■□□□□ 0.2
NACAE9PAV3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.31■□□□□ 0.2
NACAE9PAV3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NACAE9PAV3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.3■□□□□ 0.2
NACAE9PAV3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.3■□□□□ 0.2
NACAE9PAV3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.3■□□□□ 0.2
NACAE9PAV3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.3■□□□□ 0.2
NACAE9PAV3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.3■□□□□ 0.2
NACAE9PAV3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NACAE9PAV3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.3■□□□□ 0.2
NACAE9PAV3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
NACAE9PAV3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 KRT16P3-201ENST00000439127 1283 ntBASIC16.3■□□□□ 0.2
NACAE9PAV3 KRT125P-201ENST00000546827 989 ntBASIC16.3■□□□□ 0.2
NACAE9PAV3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NACAE9PAV3 AL161729.1-201ENST00000604104 1402 ntBASIC16.3■□□□□ 0.2
NACAE9PAV3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms