Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 AC127496.7-201ENST00000625110 1798 ntBASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 ABHD17AP4-201ENST00000411545 909 ntBASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MEIS3P1A6NDR6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.3■□□□□ 0.68
MEIS3P1A6NDR6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MEIS3P1A6NDR6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 AC137767.1-201ENST00000602918 1920 ntBASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 AL137060.1-201ENST00000618151 2648 ntBASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MEIS3P1A6NDR6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 KRT18P10-201ENST00000388836 1287 ntBASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 AC007029.1-201ENST00000604183 313 ntBASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
MEIS3P1A6NDR6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MEIS3P1A6NDR6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 RAP2CP1-202ENST00000605179 643 ntBASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 AC022413.1-201ENST00000624602 984 ntBASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms