Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3D21A4FU49 KRT18P24-201ENST00000344739 1156 ntBASIC20.88■□□□□ 0.93
SH3D21A4FU49 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3D21A4FU49 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SH3D21A4FU49 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SH3D21A4FU49 MIR4787-201ENST00000607364 84 ntBASIC20.87■□□□□ 0.93
SH3D21A4FU49 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SH3D21A4FU49 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3D21A4FU49 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SH3D21A4FU49 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3D21A4FU49 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SH3D21A4FU49 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3D21A4FU49 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3D21A4FU49 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SH3D21A4FU49 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3D21A4FU49 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3D21A4FU49 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.85■□□□□ 0.93
SH3D21A4FU49 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.85■□□□□ 0.93
SH3D21A4FU49 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 ANOS2P-203ENST00000472227 1816 ntBASIC20.85■□□□□ 0.93
SH3D21A4FU49 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3D21A4FU49 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SH3D21A4FU49 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SH3D21A4FU49 EP400NL-214ENST00000641289 2402 ntBASIC20.84■□□□□ 0.93
SH3D21A4FU49 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3D21A4FU49 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SH3D21A4FU49 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3D21A4FU49 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3D21A4FU49 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3D21A4FU49 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3D21A4FU49 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SH3D21A4FU49 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3D21A4FU49 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3D21A4FU49 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SH3D21A4FU49 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SH3D21A4FU49 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SH3D21A4FU49 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SH3D21A4FU49 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3D21A4FU49 DUSP8P3-201ENST00000399571 1760 ntBASIC20.83■□□□□ 0.93
SH3D21A4FU49 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3D21A4FU49 AC092068.2-201ENST00000590491 1708 ntBASIC20.83■□□□□ 0.92
SH3D21A4FU49 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3D21A4FU49 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3D21A4FU49 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3D21A4FU49 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SH3D21A4FU49 FOXO3B-201ENST00000395675 1928 ntBASIC20.82■□□□□ 0.92
SH3D21A4FU49 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3D21A4FU49 LINC00565-201ENST00000562710 2331 ntBASIC20.82■□□□□ 0.92
SH3D21A4FU49 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.82■□□□□ 0.92
SH3D21A4FU49 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 AC120024.1-201ENST00000562672 995 ntBASIC20.82■□□□□ 0.92
SH3D21A4FU49 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SH3D21A4FU49 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3D21A4FU49 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3D21A4FU49 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.81■□□□□ 0.92
SH3D21A4FU49 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3D21A4FU49 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.81■□□□□ 0.92
SH3D21A4FU49 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3D21A4FU49 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3D21A4FU49 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3D21A4FU49 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SH3D21A4FU49 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms