Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HFM1A2PYH4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HFM1A2PYH4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HFM1A2PYH4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC33.76■■■□□ 2.99
HFM1A2PYH4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
HFM1A2PYH4 AC133561.4-201ENST00000566112 224 ntBASIC33.76■■■□□ 2.99
HFM1A2PYH4 AC241377.3-202ENST00000626088 1088 ntBASIC33.76■■■□□ 2.99
HFM1A2PYH4 AC241585.3-202ENST00000628937 1088 ntBASIC33.76■■■□□ 2.99
HFM1A2PYH4 AC245100.8-202ENST00000629247 1058 ntBASIC33.76■■■□□ 2.99
HFM1A2PYH4 RALB-208ENST00000631312 311 ntTSL 5 BASIC33.76■■■□□ 2.99
HFM1A2PYH4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
HFM1A2PYH4 UNC93B3-201ENST00000308076 687 ntBASIC33.75■■■□□ 2.99
HFM1A2PYH4 SERBP1P1-201ENST00000396021 1160 ntBASIC33.75■■■□□ 2.99
HFM1A2PYH4 PTCHD3P2-201ENST00000424937 1205 ntBASIC33.75■■■□□ 2.99
HFM1A2PYH4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC33.75■■■□□ 2.99
HFM1A2PYH4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC33.75■■■□□ 2.99
HFM1A2PYH4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC33.75■■■□□ 2.99
HFM1A2PYH4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HFM1A2PYH4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HFM1A2PYH4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC33.74■■■□□ 2.99
HFM1A2PYH4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
HFM1A2PYH4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HFM1A2PYH4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
HFM1A2PYH4 AC135279.3-201ENST00000610945 1311 ntBASIC33.73■■■□□ 2.99
HFM1A2PYH4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
HFM1A2PYH4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
HFM1A2PYH4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
HFM1A2PYH4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
HFM1A2PYH4 AC024257.2-201ENST00000549699 147 ntBASIC33.72■■■□□ 2.99
HFM1A2PYH4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.72■■■□□ 2.99
HFM1A2PYH4 AL136162.1-201ENST00000607711 1078 ntBASIC33.72■■■□□ 2.99
HFM1A2PYH4 AC092171.4-201ENST00000609130 632 ntBASIC33.72■■■□□ 2.99
HFM1A2PYH4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC33.72■■■□□ 2.99
HFM1A2PYH4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC33.72■■■□□ 2.99
HFM1A2PYH4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC33.72■■■□□ 2.99
HFM1A2PYH4 ABCB10P4-201ENST00000566803 2184 ntBASIC33.71■■■□□ 2.99
HFM1A2PYH4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
HFM1A2PYH4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC33.71■■■□□ 2.99
HFM1A2PYH4 DUX4L19-201ENST00000557448 1267 ntBASIC33.71■■■□□ 2.99
HFM1A2PYH4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
HFM1A2PYH4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
HFM1A2PYH4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
HFM1A2PYH4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
HFM1A2PYH4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC33.7■■■□□ 2.99
HFM1A2PYH4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
HFM1A2PYH4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC33.7■■■□□ 2.99
HFM1A2PYH4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC33.7■■■□□ 2.99
HFM1A2PYH4 AC009086.3-201ENST00000623486 1008 ntBASIC33.7■■■□□ 2.99
HFM1A2PYH4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
HFM1A2PYH4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC33.7■■■□□ 2.99
HFM1A2PYH4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
HFM1A2PYH4 AC011298.3-201ENST00000615796 283 ntBASIC33.7■■■□□ 2.98
HFM1A2PYH4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC33.7■■■□□ 2.98
HFM1A2PYH4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC33.69■■■□□ 2.98
HFM1A2PYH4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
HFM1A2PYH4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
HFM1A2PYH4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
HFM1A2PYH4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC33.69■■■□□ 2.98
HFM1A2PYH4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
HFM1A2PYH4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC33.69■■■□□ 2.98
HFM1A2PYH4 AL138724.1-201ENST00000606771 1088 ntBASIC33.69■■■□□ 2.98
HFM1A2PYH4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
HFM1A2PYH4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC33.68■■■□□ 2.98
HFM1A2PYH4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
HFM1A2PYH4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
HFM1A2PYH4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
HFM1A2PYH4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC33.68■■■□□ 2.98
HFM1A2PYH4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
HFM1A2PYH4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC33.67■■■□□ 2.98
HFM1A2PYH4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
HFM1A2PYH4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
HFM1A2PYH4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
HFM1A2PYH4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC33.67■■■□□ 2.98
HFM1A2PYH4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
HFM1A2PYH4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC33.66■■■□□ 2.98
HFM1A2PYH4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC33.66■■■□□ 2.98
HFM1A2PYH4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
HFM1A2PYH4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
HFM1A2PYH4 SYT6-210ENST00000641643 1587 ntBASIC33.66■■■□□ 2.98
HFM1A2PYH4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
HFM1A2PYH4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC33.66■■■□□ 2.98
HFM1A2PYH4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC33.65■■■□□ 2.98
HFM1A2PYH4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
HFM1A2PYH4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC33.65■■■□□ 2.98
HFM1A2PYH4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
HFM1A2PYH4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC33.65■■■□□ 2.98
HFM1A2PYH4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC33.64■■■□□ 2.98
HFM1A2PYH4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC33.64■■■□□ 2.98
HFM1A2PYH4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC33.64■■■□□ 2.98
HFM1A2PYH4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC33.64■■■□□ 2.97
HFM1A2PYH4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC33.63■■■□□ 2.97
HFM1A2PYH4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
HFM1A2PYH4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms