Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 DUX4L18-201ENST00000553347 1267 ntBASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 GUSBP5-202ENST00000510805 1989 ntBASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.77■■□□□ 1.24
TCRBV9S1A1TA0A576 CLDN5-201ENST00000403084 2357 ntBASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 AC120024.1-201ENST00000562672 995 ntBASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TCRBV9S1A1TA0A576 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TCRBV9S1A1TA0A576 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 LINC00565-201ENST00000562710 2331 ntBASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 AF131216.4-201ENST00000638924 1588 ntBASIC22.74■■□□□ 1.23
TCRBV9S1A1TA0A576 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TCRBV9S1A1TA0A576 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 ABHD17AP5-201ENST00000580133 923 ntBASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 NTF6A-201ENST00000591175 560 ntBASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 AC079630.1-202ENST00000618127 1840 ntBASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 LINC00526-201ENST00000581067 1875 ntBASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TCRBV9S1A1TA0A576 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TCRBV9S1A1TA0A576 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV9S1A1TA0A576 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TCRBV9S1A1TA0A576 ECEL1P1-201ENST00000373592 1742 ntBASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 MIR4281-201ENST00000580852 62 ntBASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms