Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 HLA-V-202ENST00000446817 847 ntBASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM27A0A1W2PRY6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L13-201ENST00000554103 1267 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L15-201ENST00000611059 1267 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L23-201ENST00000615195 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L24-201ENST00000617576 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L22-201ENST00000618238 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L20-201ENST00000619712 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L21-201ENST00000622058 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L10-201ENST00000622460 1267 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4L25-201ENST00000624915 1269 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 AC026310.3-201ENST00000625186 2373 ntBASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM27A0A1W2PRY6 AC073130.3-201ENST00000624389 2278 ntBASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM27A0A1W2PRY6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMIM27A0A1W2PRY6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM27A0A1W2PRY6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 LINC01971-201ENST00000617888 1048 ntBASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMIM27A0A1W2PRY6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMIM27A0A1W2PRY6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 MIR3960-201ENST00000583311 91 ntBASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms