Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 LINC01124-201ENST00000409786 2117 ntBASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 AL138724.1-201ENST00000606771 1088 ntBASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPVL3A0A0U1RRI6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC141586.4-201ENST00000624558 1573 ntBASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC006455.2-201ENST00000429931 906 ntBASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC009086.3-201ENST00000623486 1008 ntBASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 LINC00543-201ENST00000567234 1845 ntBASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CENPVL3A0A0U1RRI6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 MIR935-201ENST00000401179 91 ntBASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 MIR4767-201ENST00000582827 78 ntBASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC011298.3-201ENST00000615796 283 ntBASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPVL3A0A0U1RRI6 AL139125.2-201ENST00000623134 1869 ntBASIC18.33■□□□□ 0.53
CENPVL3A0A0U1RRI6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPVL3A0A0U1RRI6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CENPVL3A0A0U1RRI6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPVL3A0A0U1RRI6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPVL3A0A0U1RRI6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 AL136967.2-201ENST00000623968 743 ntBASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPVL3A0A0U1RRI6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 AF213884.3-201ENST00000563833 479 ntBASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 MIR3181-201ENST00000578512 73 ntBASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPVL3A0A0U1RRI6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 MIR939-201ENST00000401314 82 ntBASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 AP001330.3-201ENST00000520123 633 ntBASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPVL3A0A0U1RRI6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms