Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 AL137060.1-201ENST00000618151 2648 ntBASIC16.48■□□□□ 0.23
TRAV8-6A0A0B4J262 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 AL592293.1-201ENST00000502889 1188 ntBASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 AC141586.4-201ENST00000624558 1573 ntBASIC16.47■□□□□ 0.23
TRAV8-6A0A0B4J262 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 AC233723.2-201ENST00000623798 2106 ntBASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV8-6A0A0B4J262 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRAV8-6A0A0B4J262 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 NTF6A-201ENST00000591175 560 ntBASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-6A0A0B4J262 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 U85056.1-201ENST00000616429 682 ntBASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 AL391422.3-201ENST00000603791 2761 ntBASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-6A0A0B4J262 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms