Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-4A0A0B4J246 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-4A0A0B4J246 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 HLA-L-211ENST00000482052 1765 ntBASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-4A0A0B4J246 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 C9orf163-202ENST00000624034 2573 ntBASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 AC011551.1-201ENST00000614101 683 ntBASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 AL161729.1-201ENST00000604104 1402 ntBASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-4A0A0B4J246 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV8-4A0A0B4J246 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 DUSP8P5-201ENST00000422884 1815 ntBASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 BHLHE23-202ENST00000612929 1109 ntBASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-4A0A0B4J246 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-4A0A0B4J246 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-4A0A0B4J246 AL117328.2-201ENST00000624617 1940 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms